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Gm5570 Gene Detail
Summary
  • Symbol
    Gm5570
  • Name
    predicted gene 5570
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3644382
    NCBI Gene: 434019
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr6:60055004-60127030 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 28.89 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    384 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644382
 lncRNA gene Chr6:60008952-60127030 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006974
 lincRNA gene Chr6:59789795-59876770 (+)
A/J MGP_AJ_G0006969
 lincRNA gene Chr6:57124652-57250544 (+)
AKR/J MGP_AKRJ_G0006939
 lincRNA gene Chr6:59004219-59126822 (+)
BALB/cJ MGP_BALBcJ_G0006945
 lincRNA gene Chr6:57446103-57573666 (+)
C3H/HeJ MGP_C3HHeJ_G0006889
 lincRNA gene Chr6:59052754-59149379 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007108
 lincRNA gene Chr6:61040909-61168381 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0006805
 lincRNA gene Chr6:58491805-58495717 (-)
CBA/J MGP_CBAJ_G0006871
 lincRNA gene Chr6:63620976-63686249 (+)
DBA/2J MGP_DBA2J_G0006891
 lincRNA gene Chr6:56883286-56952916 (+)
FVB/NJ MGP_FVBNJ_G0006915
 lincRNA gene Chr6:56395159-56527802 (+)
LP/J MGP_LPJ_G0006974
 lincRNA gene Chr6:59730663-59821646 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006896
 lincRNA gene Chr6:66454692-66459225 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007114
 lincRNA gene Chr6:58924577-59020868 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0006860
 lincRNA gene Chr6:58622574-58626406 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    2
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 434019 NCBI Gene Model | MGI Sequence Detail 72027 C57BL/6J ±  kb
transcript NR_152156 RefSeq | MGI Sequence Detail 2527 C57BL/6  
polypeptide Q3UYE3 UniProt | EBI | MGI Sequence Detail 178 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR012674 Calycin
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 8
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory