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Gm5389 Pseudogene Detail
Summary
  • Symbol
    Gm5389
  • Name
    predicted gene 5389
  • Feature Type
    pseudogene
  • IDs
    MGI:3644211
    NCBI Gene: 385362
  • Alliance
Location &
Maps
more
  • Sequence Map
    ChrX:57659732-57660907 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 32.17 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    17 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644211
pseudogene ChrX:57659599-57661090 (+)
129S1/SvImJ MGP_129S1SvImJ_G0014434
pseudogene ChrX:52997607-52998784 (+)
A/J MGP_AJ_G0014445
pseudogene ChrX:53184880-53186055 (+)
AKR/J MGP_AKRJ_G0014375
pseudogene ChrX:54591090-54592265 (+)
BALB/cJ MGP_BALBcJ_G0014400
pseudogene ChrX:52608085-52609260 (+)
C3H/HeJ MGP_C3HHeJ_G0014234
pseudogene ChrX:53541306-53542481 (+)
C57BL/6NJ MGP_C57BL6NJ_G0014860
pseudogene ChrX:54381547-54382722 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0012643
pseudogene ChrX:52553905-52555070 (+)
CAST/EiJ MGP_CASTEiJ_G0013870
pseudogene ChrX:39389611-39390776 (+)
CBA/J MGP_CBAJ_G0014216
pseudogene ChrX:55986420-55987595 (+)
DBA/2J MGP_DBA2J_G0014299
pseudogene ChrX:52766618-52767793 (+)
FVB/NJ MGP_FVBNJ_G0014293
pseudogene ChrX:52357978-52359153 (+)
LP/J MGP_LPJ_G0014391
pseudogene ChrX:53561099-53562274 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0014328
pseudogene ChrX:57518855-57520030 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0014837
pseudogene ChrX:53005890-53007065 (+)
PWK/PhJ MGP_PWKPhJ_G0013680
pseudogene ChrX:37617043-37618216 (+)
SPRET/EiJ MGP_SPRETEiJ_G0013483
pseudogene ChrX:40136426-40137592 (+)
WSB/EiJ MGP_WSBEiJ_G0013942
pseudogene ChrX:52537209-52538374 (+)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000081896 Ensembl Gene Model | MGI Sequence Detail 1176 C57BL/6J ±  kb
transcript ENSMUST00000120893 Ensembl | MGI Sequence Detail 1176 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 5
  • Earliest
    J:71095 Cortinas MN, et al., Molecular evolution of Aldolase A pseudogenes in mice: multiple origins, subsequent duplications, and heterogeneity of evolutionary rates. Mol Biol Evol. 2001 Sep;18(9):1643-53

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/31/2020
MGI 6.15
The Jackson Laboratory