Gm5187 Pseudogene Detail

Summary

• Symbol
  Gm5187
• Name
  predicted gene 5187

• Feature Type
  pseudogene
• IDs
  MGI:3644132
  NCBI Gene: 382635
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:107171335-107172325 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 57.90 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  80 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644132	pseudogene	Chr12:107171335-107172325 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010947	pseudogene	Chr12:109225617-109226607 (-)
A/J	MGP_AJ_G0010954	pseudogene	Chr12:105116812-105117802 (-)
AKR/J	MGP_AKRJ_G0010909	pseudogene	Chr12:108176441-108177431 (-)
BALB/cJ	MGP_BALBcJ_G0010927	pseudogene	Chr12:105529058-105530048 (-)
C3H/HeJ	MGP_C3HHeJ_G0010825	pseudogene	Chr12:108608910-108609900 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011199	pseudogene	Chr12:112572787-112573777 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009805	pseudogene	Chr12:101674062-101675198 (-)
CAST/EiJ	MGP_CASTEiJ_G0010656	pseudogene	Chr12:103484844-103488218 (-)
CBA/J	MGP_CBAJ_G0010798	pseudogene	Chr12:117069924-117071038 (-)
DBA/2J	MGP_DBA2J_G0010847	pseudogene	Chr12:104624531-104625521 (-)
FVB/NJ	MGP_FVBNJ_G0010860	pseudogene	Chr12:103417581-103418548 (-)
LP/J	MGP_LPJ_G0010930	pseudogene	Chr12:109091350-109092340 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010840	pseudogene	Chr12:120346345-120347335 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011185	pseudogene	Chr12:107590277-107591267 (-)
PWK/PhJ	MGP_PWKPhJ_G0010540	pseudogene	Chr12:99240212-99241200 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010358	pseudogene	Chr12:101817913-101818876 (-)
WSB/EiJ	MGP_WSBEiJ_G0010699	pseudogene	Chr12:108534502-108535492 (-)

Homology

• Gene Tree
  Gm5187
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000082362 (Evidence)
• NCBI Gene
  382635

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082362	Ensembl Gene Model | MGI Sequence Detail	991	C57BL/6J
transcript	ENSMUST00000117317	Ensembl | MGI Sequence Detail	991	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;