Gm14650 Pseudogene Detail

Summary

• Symbol
  Gm14650
• Name
  predicted gene 14650
• Synonyms
  EG626883

• Feature Type
  pseudogene
• IDs
  MGI:3644080
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  ChrX:57675760-57676648 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 33.16 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  23 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644080	pseudogene	ChrX:57675760-57676648 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014441	pseudogene	ChrX:53961198-53962086 (-)
A/J	MGP_AJ_G0011396	pseudogene	Chr17:90424732-90425549 (-)
AKR/J	MGP_AKRJ_G0014383	pseudogene	ChrX:55585992-55586880 (-)
BALB/cJ	MGP_BALBcJ_G0014408	pseudogene	ChrX:53566455-53567343 (-)
C3H/HeJ	MGP_C3HHeJ_G0014241	pseudogene	ChrX:54513309-54514197 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014868	pseudogene	ChrX:55386168-55387056 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0014224	pseudogene	ChrX:57020667-57021555 (-)
DBA/2J	MGP_DBA2J_G0014307	pseudogene	ChrX:53745271-53746159 (-)
FVB/NJ	MGP_FVBNJ_G0014301	pseudogene	ChrX:53316154-53317042 (-)
LP/J	MGP_LPJ_G0014399	pseudogene	ChrX:54541178-54542066 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014335	pseudogene	ChrX:58577239-58578641 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014845	pseudogene	ChrX:53982227-53983115 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0013934	pseudogene	ChrX:50650791-50651670 (-)

Homology

• Gene Tree
  Gm14650
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16

• Ensembl
  ENSMUSG00000083982 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083982	Ensembl Gene Model | MGI Sequence Detail	889	C57BL/6J
transcript	ENSMUST00000120400	Ensembl | MGI Sequence Detail	889	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm14650:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr163461	ChrX:57676666-57676668 (-)	-19 bp