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Gm6548 Pseudogene Detail
Summary
  • Symbol
    Gm6548
  • Name
    predicted gene 6548
  • Feature Type
    pseudogene
  • IDs
    MGI:3644071
    NCBI Gene: 625054
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr17:78850792-78851956 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 49.56 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    62 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644071
pseudogene Chr17:78850504-78852544 (-)
129S1/SvImJ MGP_129S1SvImJ_G0011399
pseudogene Chr17:81685794-81686958 (-)
A/J MGP_AJ_G0011387
pseudogene Chr17:79187166-79188330 (-)
AKR/J MGP_AKRJ_G0011354
pseudogene Chr17:80385827-80386991 (-)
BALB/cJ MGP_BALBcJ_G0011369
pseudogene Chr17:79050335-79051499 (-)
C3H/HeJ MGP_C3HHeJ_G0011255
pseudogene Chr17:81292224-81293388 (-)
C57BL/6NJ MGP_C57BL6NJ_G0011664
pseudogene Chr17:84667877-84669041 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0011235
pseudogene Chr17:88198200-88199810 (-)
DBA/2J MGP_DBA2J_G0011286
pseudogene Chr17:77704256-77706103 (-)
FVB/NJ MGP_FVBNJ_G0011290
pseudogene Chr17:77222938-77224102 (-)
LP/J MGP_LPJ_G0011359
pseudogene Chr17:82533665-82535683 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0011283
pseudogene Chr17:88318358-88319521 (-)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0011102
pseudogene Chr17:81679729-81681989 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000091549 Ensembl Gene Model | MGI Sequence Detail 1165 C57BL/6J ±  kb
transcript ENSMUST00000167498 Ensembl | MGI Sequence Detail 1165 Not Applicable  
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 7
  • Earliest
    J:23000 MGD Nomenclature Committee, 2/14/1995;
  • Latest
    J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/12/2020
MGI 6.15
The Jackson Laboratory