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Gm5501 Pseudogene Detail
Summary
  • Symbol
    Gm5501
  • Name
    predicted gene 5501
  • Feature Type
    pseudogene
  • IDs
    MGI:3644023
    NCBI Gene: 433161
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr18:9916927-9917758 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 18, 4.91 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644023
pseudogene Chr18:9916925-9917758 (+)
129S1/SvImJ MGP_129S1SvImJ_G0013833
pseudogene Chr7:18011305-18012048 (-)
A/J MGP_AJ_G0011408
pseudogene Chr18:6797939-6798754 (+)
AKR/J MGP_AKRJ_G0011372
pseudogene Chr18:6969470-6970607 (+)
BALB/cJ MGP_BALBcJ_G0011384
pseudogene Chr18:6771342-6772157 (+)
C3H/HeJ MGP_C3HHeJ_G0011273
pseudogene Chr18:6860439-6861254 (+)
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0013313
pseudogene Chr7:14828517-14829260 (-)
CBA/J MGP_CBAJ_G0011250
pseudogene Chr18:7272107-7277015 (+)
DBA/2J MGP_DBA2J_G0011301
pseudogene Chr18:6644035-6647383 (+)
FVB/NJ MGP_FVBNJ_G0011308
pseudogene Chr18:6614885-6615698 (+)
LP/J MGP_LPJ_G0013775
pseudogene Chr7:18337343-18338086 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0011299
pseudogene Chr18:7454709-7455522 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0011665
pseudogene Chr18:6797191-6799222 (+)
PWK/PhJ MGP_PWKPhJ_G0013125
pseudogene Chr7:14667077-14667820 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0011118
pseudogene Chr18:6785102-6789404 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000092039 Ensembl Gene Model | MGI Sequence Detail 832 C57BL/6J ±  kb
transcript ENSMUST00000165917 Ensembl | MGI Sequence Detail 832 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 6
    Phenotypes 2
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory