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Gm5501 Pseudogene Detail
Summary
  • Symbol
    Gm5501
  • Name
    predicted gene 5501
  • Feature Type
    pseudogene
  • IDs
    MGI:3644023
    NCBI Gene: 433161
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr18:9916927-9917758 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 4.91 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644023
 pseudogene Chr18:9916925-9917758 (+)
129S1/SvImJ MGP_129S1SvImJ_G0013833
 pseudogene Chr7:18011305-18012048 (-)
A/J MGP_AJ_G0011408
 pseudogene Chr18:6797939-6798754 (+)
AKR/J MGP_AKRJ_G0011372
 pseudogene Chr18:6969470-6970607 (+)
BALB/cJ MGP_BALBcJ_G0011384
 pseudogene Chr18:6771342-6772157 (+)
C3H/HeJ MGP_C3HHeJ_G0011273
 pseudogene Chr18:6860439-6861254 (+)
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0013313
 pseudogene Chr7:14828517-14829260 (-)
CBA/J MGP_CBAJ_G0011250
 pseudogene Chr18:7272107-7277015 (+)
DBA/2J MGP_DBA2J_G0011301
 pseudogene Chr18:6644035-6647383 (+)
FVB/NJ MGP_FVBNJ_G0011308
 pseudogene Chr18:6614885-6615698 (+)
LP/J MGP_LPJ_G0013775
 pseudogene Chr7:18337343-18338086 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0011299
 pseudogene Chr18:7454709-7455522 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0011665
 pseudogene Chr18:6797191-6799222 (+)
PWK/PhJ MGP_PWKPhJ_G0013125
 pseudogene Chr7:14667077-14667820 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0011118
 pseudogene Chr18:6785102-6789404 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    19
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000092039 Ensembl Gene Model | MGI Sequence Detail 832 C57BL/6J ±  kb
transcript ENSMUST00000165917 Ensembl | MGI Sequence Detail 832 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 6
    Phenotypes 2
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory