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Gm5901 Gene Detail
Summary
  • Symbol
    Gm5901
  • Name
    predicted gene 5901
  • Feature Type
    protein coding gene
  • IDs
    MGI:3643909
    NCBI Gene: 100503879
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:105375038-105378377 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 55.84 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    4 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3643909
protein coding gene Chr7:105374979-105378377 (+)
129S1/SvImJ MGP_129S1SvImJ_G0032750
protein coding gene Chr7:108619108-108622297 (+)
A/J MGP_AJ_G0032730
protein coding gene Chr7:105782185-105785374 (+)
AKR/J MGP_AKRJ_G0032663
protein coding gene Chr7:108548724-108551913 (+)
BALB/cJ MGP_BALBcJ_G0032736
protein coding gene Chr7:105498749-105501938 (+)
C3H/HeJ MGP_C3HHeJ_G0032445
protein coding gene Chr7:108643961-108647150 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033241
protein coding gene Chr7:112936022-112939211 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030225
protein coding gene Chr7:107761004-107764202 (+)
CAST/EiJ MGP_CASTEiJ_G0031775
protein coding gene Chr7:100466289-100469483 (+)
CBA/J MGP_CBAJ_G0032419
protein coding gene Chr7:116716978-116720167 (+)
DBA/2J MGP_DBA2J_G0032572
protein coding gene Chr7:104053087-104056276 (+)
FVB/NJ MGP_FVBNJ_G0032525
protein coding gene Chr7:103858794-103861983 (+)
LP/J MGP_LPJ_G0032663
protein coding gene Chr7:110022876-110026065 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0032557
protein coding gene Chr7:118322539-118325733 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033262
protein coding gene Chr7:107595399-107598588 (+)
PWK/PhJ MGP_PWKPhJ_G0031488
protein coding gene Chr7:96984198-96987389 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031337
protein coding gene Chr7:94706879-94710074 (+)
WSB/EiJ MGP_WSBEiJ_G0031892
protein coding gene Chr7:108235953-108239142 (+)



Homology
more
  • Human Ortholog
    C11orf42, chromosome 11 open reading frame 42
  • Vertebrate Orthologs
    7
  • Human Ortholog
    C11orf42, chromosome 11 open reading frame 42
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 160298
    neXtProt AC: NX_Q8N5U0
    UniProt: Q8N5U0

  • Chr Location
    11p15.4; chr11:6202997-6226783 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Expression
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000078611 Ensembl Gene Model | MGI Sequence Detail 3340 C57BL/6J ±  kb
transcript ENSMUST00000106805 Ensembl | MGI Sequence Detail 1140 Not Applicable  
polypeptide ENSMUSP00000102417 Ensembl | MGI Sequence Detail 333 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR031366 Protein of unknown function DUF4663
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 17
    Phenotypes 9
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
02/18/2020
MGI 6.14
The Jackson Laboratory