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Gm5900 Pseudogene Detail
Summary
  • Symbol
    Gm5900
  • Name
    predicted pseudogene 5900
  • Feature Type
    pseudogene
  • IDs
    MGI:3643907
    NCBI Gene: 545987
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr7:104599122-104599496 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 55.70 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3643907
pseudogene Chr7:104598383-104599642 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027920
protein coding gene Chr3:140956672-140958904 (+)
A/J MGP_AJ_G0027877
protein coding gene Chr3:135973797-135975840 (+)
AKR/J MGP_AKRJ_G0027843
protein coding gene Chr3:139589131-139590350 (+)
BALB/cJ MGP_BALBcJ_G0032719
protein coding gene Chr7:105008621-105009841 (-)
C3H/HeJ MGP_C3HHeJ_G0027619
protein coding gene Chr3:139919468-139921510 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028333
protein coding gene Chr3:145822074-145823294 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025671
protein coding gene Chr3:131068446-131078696 (+)
CAST/EiJ MGP_CASTEiJ_G0027075
protein coding gene Chr3:139670683-139680837 (+)
CBA/J MGP_CBAJ_G0027596
protein coding gene Chr3:150777493-150779535 (+)
DBA/2J MGP_DBA2J_G0027735
protein coding gene Chr3:135096666-135098794 (+)
FVB/NJ MGP_FVBNJ_G0027702
protein coding gene Chr3:132556600-132558642 (+)
LP/J MGP_LPJ_G0027845
protein coding gene Chr3:142360385-142362427 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027734
protein coding gene Chr3:158876219-158886406 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028391
protein coding gene Chr3:139133179-139134390 (+)
PWK/PhJ MGP_PWKPhJ_G0026799
protein coding gene Chr3:134839428-134850012 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026626
protein coding gene Chr3:137211128-137221421 (+)
WSB/EiJ MGP_WSBEiJ_G0031873
protein coding gene Chr7:107816887-107817654 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm5900
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Interactions
less
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000094685 Ensembl Gene Model | MGI Sequence Detail 375 C57BL/6J ±  kb
transcript ENSMUST00000179862 Ensembl | MGI Sequence Detail 375 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 14
    Phenotypes 9
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
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last database update
10/12/2021
MGI 6.17
The Jackson Laboratory