Gm5283 Pseudogene Detail

Summary

• Symbol
  Gm5283
• Name
  predicted gene 5283

• Feature Type
  pseudogene
• IDs
  MGI:3643834
  NCBI Gene: 383936
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:17284806-17285139 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 4.67 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  93 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643834	pseudogene	Chr3:17284600-17285215 (-)
129S1/SvImJ	ENSMUSG00200018294	pseudogene	Chr3:14023474-14023807 (-)
A/J	ENSMUSG00195016507	pseudogene	Chr3:14087943-14088276 (-)
AKR/J	ENSMUSG00220009165	pseudogene	Chr3:14110653-14110986 (-)
BALB/cJ	ENSMUSG00180001031	pseudogene	Chr3:14114057-14114390 (-)
C3H/HeJ	ENSMUSG00175003223	pseudogene	Chr3:14111045-14111378 (-)
C57BL/6NJ	ENSMUSG00215001442	pseudogene	Chr3:14346129-14346462 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010756	pseudogene	Chr3:12621957-12622305 (-)
CAST/EiJ	ENSTCUG00005024655	pseudogene	Chr3:14067758-14068091 (-)
CBA/J	ENSMUSG00210001678	pseudogene	Chr3:14079954-14080287 (-)
DBA/2J	ENSMUSG00185000699	pseudogene	Chr3:14236297-14236630 (-)
FVB/NJ	ENSMUSG00205002529	pseudogene	Chr3:13632348-13632681 (-)
JF1/MsJ	ENSUMUG00000018835	pseudogene	Chr3:13894922-13895255 (-)
LP/J	ENSMUSG00230004454	pseudogene	Chr3:16227111-16227444 (-)
NOD/ShiLtJ	ENSMUSG00190002523	pseudogene	Chr3:14433455-14433788 (-)
NZO/HlLtJ	ENSMUSG00225001074	pseudogene	Chr3:18818461-18818794 (-)
PWK/PhJ	ENSLUMG00010003272	pseudogene	Chr3:13954329-13954662 (-)
SPRET/EiJ	ENSMSPG00010001883	pseudogene	Chr3:13904106-13904439 (-)
WSB/EiJ	ENSIUOG00005001524	pseudogene	Chr3:14282685-14283018 (-)

Homology

• Gene Tree
  Gm5283
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm5283
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000095827 (Evidence)
• NCBI Gene
  383936

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000095827	Ensembl Gene Model | MGI Sequence Detail	334	C57BL/6J
transcript	ENSMUST00000177874	Ensembl | MGI Sequence Detail	334	Not Applicable
polypeptide	B7ZWE1	UniProt | EBI | MGI Sequence Detail	87	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR005124 Vacuolar (H+)-ATPase G subunit

References

• Summaries
  All 8

  Diseases 1

  Phenotypes 2
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426