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Gm5724 Gene Detail
Summary
  • Symbol
    Gm5724
  • Name
    predicted gene 5724
  • Feature Type
    protein coding gene
  • IDs
    MGI:3643685
    NCBI Gene: 435927
  • Gene Overview
    MyGene.info: SLCO1A2
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr6:141708118-141773810 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 72.72 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    593 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3643685
protein coding gene Chr6:141707696-141778102 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031454
protein coding gene Chr6:146464016-146549328 (-)
A/J MGP_AJ_G0031429
protein coding gene Chr6:140686699-140773414 (-)
AKR/J MGP_AKRJ_G0031357
protein coding gene Chr6:144892581-144968601 (-)
BALB/cJ MGP_BALBcJ_G0031436
protein coding gene Chr6:140508941-140568054 (-)
C3H/HeJ MGP_C3HHeJ_G0031158
protein coding gene Chr6:144957670-145018877 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031898
protein coding gene Chr6:150473618-150541638 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0030526
protein coding gene Chr6:144510091-144572574 (-)
CBA/J MGP_CBAJ_G0031118
protein coding gene Chr6:156205431-156278416 (-)
DBA/2J MGP_DBA2J_G0031275
protein coding gene Chr6:139520456-139582226 (-)
FVB/NJ MGP_FVBNJ_G0031226
protein coding gene Chr6:138314713-138374169 (-)
LP/J MGP_LPJ_G0031359
protein coding gene Chr6:146608647-146690333 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031266
protein coding gene Chr6:160101922-160168959 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031930
protein coding gene Chr6:144725103-144792620 (-)
PWK/PhJ MGP_PWKPhJ_G0030253
protein coding gene Chr6:138029693-138092780 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030077
protein coding gene Chr6:142950360-143011556 (-)
WSB/EiJ MGP_WSBEiJ_G0030619
protein coding gene Chr6:145378114-145439185 (-)



Homology
more
  • Human Ortholog
    SLCO1A2, solute carrier organic anion transporter family member 1A2
  • Human Ortholog
    SLCO1A2, solute carrier organic anion transporter family member 1A2
    Orthology source: HGNC
  • Synonyms
    OATP, OATP1A2, OATP-A, SLC21A3
  • Links
    NCBI Gene ID: 6579
    neXtProt AC: NX_P46721
    UniProt: P46721

  • Chr Location
    12p12.1; chr12:21264600-21403657 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000084927 Ensembl Gene Model | MGI Sequence Detail 65693 C57BL/6J ±  kb
transcript ENSMUST00000148411 Ensembl | MGI Sequence Detail 2449 Not Applicable  
polypeptide ENSMUSP00000117177 Ensembl | MGI Sequence Detail 670 Not Applicable  
For the selected sequence
Protein
Information
less
References
more
  • Summaries
    All 15
    Gene Ontology 1
    Phenotypes 9
  • Earliest
    J:85162 Hansen J, et al., A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Proc Natl Acad Sci U S A. 2003 Aug 19;100(17):9918-22
  • Latest
    J:273941 Slijepcevic D, et al., Hepatic uptake of conjugated bile acids is mediated by both sodium taurocholate cotransporting polypeptide and organic anion transporting polypeptides and modulated by intestinal sensing of plasma bile acid levels in mice. Hepatology. 2017 Nov;66(5):1631-1643

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory