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Cntnap5a Gene Detail
Summary
  • Symbol
    Cntnap5a
  • Name
    contactin associated protein-like 5A
  • Synonyms
    Caspr5-1
  • Feature Type
    protein coding gene
  • IDs
    MGI:3643623
    NCBI Gene: 636808
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr1:115684756-116587323 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      902568 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 51.59 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    CNTNAP5, contactin associated protein like 5
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CNTNAP5, contactin associated protein like 5
    Orthology source: HomoloGene, HGNC
  • Synonyms
    caspr5
  • Links
    NCBI Gene ID: 129684
    neXtProt AC: NX_Q8WYK1
    UniProt: Q8WYK1

  • Chr Location
    2q14.3; chr2:124025287-124921201 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022099 VEGA Gene Model | MGI Sequence Detail 902568 C57BL/6J ±  kb
transcript OTTMUST00000052468 VEGA | MGI Sequence Detail 10945 Not Applicable  
polypeptide OTTMUSP00000024881 VEGA | MGI Sequence Detail 1304 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    7365 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 4
    cDNA 1
    Primer pair 1
    Other 2

    Microarray probesets 1
References
more
  • Summaries
    All 19
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 6
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:144618 Weichenhan D, et al., A mouse translocation associated with Caspr5-2 disruption and perinatal lethality. Mamm Genome. 2008 Dec;19(10-12):675-86

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/05/2017
MGI 6.11
The Jackson Laboratory