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Gm5617 Gene Detail
Summary
  • Symbol
    Gm5617
  • Name
    predicted gene 5617
  • Feature Type
    protein coding gene
  • IDs
    MGI:3643566
    NCBI Gene: 434402
  • Alliance
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:48495442-48495972 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 26.43 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    43 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3643566
protein coding gene Chr9:48495343-48495975 (+)
129S1/SvImJ MGP_129S1SvImJ_G0034762
protein coding gene Chr9:47271711-47272330 (+)
A/J MGP_AJ_G0034743
protein coding gene Chr9:45873176-45873795 (+)
AKR/J MGP_AKRJ_G0034671
protein coding gene Chr9:46828105-46828724 (+)
BALB/cJ MGP_BALBcJ_G0034735
protein coding gene Chr9:45596971-45597590 (+)
C3H/HeJ MGP_C3HHeJ_G0034445
protein coding gene Chr9:47283173-47283792 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035255
protein coding gene Chr9:48622462-48623081 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032168
protein coding gene Chr9:45352501-45353120 (+)
CAST/EiJ MGP_CASTEiJ_G0033767
protein coding gene Chr9:47201579-47202198 (+)
CBA/J MGP_CBAJ_G0034417
protein coding gene Chr9:50333373-50333992 (+)
DBA/2J MGP_DBA2J_G0034576
protein coding gene Chr9:45726227-45726846 (+)
FVB/NJ MGP_FVBNJ_G0034517
protein coding gene Chr9:44981282-44981901 (+)
LP/J MGP_LPJ_G0034657
protein coding gene Chr9:47630514-47631133 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034561
protein coding gene Chr9:52051978-52052597 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035276
protein coding gene Chr9:46752744-46753363 (+)
PWK/PhJ MGP_PWKPhJ_G0033472
protein coding gene Chr9:45687174-45687793 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033307
protein coding gene Chr9:47067679-47068298 (+)
WSB/EiJ MGP_WSBEiJ_G0033880
protein coding gene Chr9:46801454-46802073 (+)



Homology
more
  • Human Ortholog
    C11orf71, chromosome 11 open reading frame 71
  • Vertebrate Orthologs
    6
  • Human Ortholog
    C11orf71, chromosome 11 open reading frame 71
    Orthology source: HomoloGene, HGNC
  • Synonyms
    URLC7
  • Links
    NCBI Gene ID: 54494
    neXtProt AC: NX_Q6IPW1
    UniProt: Q6IPW1

  • Chr Location
    11q23.2; chr11:114391448-114400550 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 2 alleles in 1 genetic background
    4 phenotype references
Male mice homozygous for a mutation are viable and show normal fertility.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000042293 Ensembl Gene Model | MGI Sequence Detail 531 C57BL/6J ±  kb
transcript ENSMUST00000048824 Ensembl | MGI Sequence Detail 531 Not Applicable  
polypeptide ENSMUSP00000040380 Ensembl | MGI Sequence Detail 117 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 164
    cDNA 164

    Microarray probesets 2
References
more
  • Summaries
    All 16
    Phenotypes 4
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:234235 Miyata H, et al., Genome engineering uncovers 54 evolutionarily conserved and testis-enriched genes that are not required for male fertility in mice. Proc Natl Acad Sci U S A. 2016 Jul 12;113(28):7704-10

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/05/2019
MGI 6.14
The Jackson Laboratory