Gm4925 Pseudogene Detail

Summary

• Symbol
  Gm4925
• Name
  predicted gene 4925

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3643371
  NCBI Gene: 237433
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:88565403-88566963 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 44.19 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643371	pseudogene	Chr10:88565394-88566963 (-)
129S1/SvImJ	ENSMUSG00200031193	pseudogene	Chr10:85063394-85064955 (-)
A/J	ENSMUSG00195022582	pseudogene	Chr10:85508399-85509959 (-)
AKR/J	ENSMUSG00220023026	pseudogene	Chr10:85114898-85116458 (-)
BALB/cJ	ENSMUSG00180033491	pseudogene	Chr10:85511394-85512955 (-)
C3H/HeJ	ENSMUSG00175023100	pseudogene	Chr10:85406489-85408052 (-)
C57BL/6NJ	ENSMUSG00215034053	pseudogene	Chr10:85066018-85067578 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036824	pseudogene	Chr10:82554311-82555839 (-)
CAST/EiJ	ENSTCUG00005035198	pseudogene	Chr10:84787867-84789424 (-)
CBA/J	ENSMUSG00210036150	pseudogene	Chr10:85246946-85248509 (-)
DBA/2J	ENSMUSG00185044922	pseudogene	Chr10:85468322-85469881 (-)
FVB/NJ	ENSMUSG00205022151	pseudogene	Chr10:85089786-85091347 (-)
JF1/MsJ	ENSUMUG00000029229	pseudogene	Chr10:86806382-86807939 (-)
LP/J	ENSMUSG00230019367	pseudogene	Chr10:87354480-87356039 (-)
NOD/ShiLtJ	ENSMUSG00190018228	pseudogene	Chr10:85493593-85495153 (-)
NZO/HlLtJ	ENSMUSG00225053843	pseudogene	Chr10:91616902-91618462 (-)
PWK/PhJ	ENSLUMG00010023178	pseudogene	Chr10:85094989-85096542 (-)
SPRET/EiJ	ENSMSPG00010033685	pseudogene	Chr10:86617685-86619223 (-)
WSB/EiJ	ENSIUOG00005037627	pseudogene	Chr10:85193004-85194563 (-)

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Transposon induced
  1
• Genomic Mutations
  2 involving Gm4925
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  2

• Ensembl
  ENSMUSG00000069540 (Evidence), ENSMUSG00000121647 (Evidence)
• NCBI Gene
  237433

Representative Sequences			Length	Strain/Species
genomic	237433	NCBI Gene Model | MGI Sequence Detail	1561	C57BL/6J
transcript	NM_001037166	RefSeq | MGI Sequence Detail	1561	C57BL/6
polypeptide	NP_001032243	RefSeq | MGI Sequence Detail	132	C57BL/6

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 12

  Phenotypes 6
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87