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Gm6578 Pseudogene Detail
Summary
  • Symbol
    Gm6578
  • Name
    predicted gene 6578
  • Feature Type
    pseudogene
  • IDs
    MGI:3643037
    NCBI Gene: 625347
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr6:12099518-12109580 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 5.18 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    23 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3643037
pseudogene Chr6:12099518-12109583 (-)
129S1/SvImJ MGP_129S1SvImJ_G0039734
pseudogene Chr6:9108607-9126773 (-)
A/J MGP_AJ_G0039736
pseudogene Chr6:8771860-8782118 (-)
AKR/J MGP_AKRJ_G0039660
pseudogene Chr6:9082981-9097093 (-)
BALB/cJ MGP_BALBcJ_G0039704
pseudogene Chr6:8791760-8802069 (-)
C3H/HeJ MGP_C3HHeJ_G0039366
pseudogene Chr6:9004505-9015540 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040266
pseudogene Chr6:9508149-9518811 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0036893
pseudogene Chr6:8118018-8127102 (-)
CAST/EiJ MGP_CASTEiJ_G0038484
pseudogene Chr6:8872969-8886798 (-)
CBA/J MGP_CBAJ_G0039338
pseudogene Chr6:9651177-9660948 (-)
DBA/2J MGP_DBA2J_G0039531
pseudogene Chr6:8731026-8741367 (-)
FVB/NJ MGP_FVBNJ_G0039489
pseudogene Chr6:8637392-8647420 (-)
LP/J MGP_LPJ_G0039569
pseudogene Chr6:9084506-9096782 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0039491
pseudogene Chr6:10275186-10288462 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040366
pseudogene Chr6:8954743-8965785 (-)
PWK/PhJ MGP_PWKPhJ_G0038158
pseudogene Chr6:8482994-8494299 (-)
SPRET/EiJ MGP_SPRETEiJ_G0037906
pseudogene Chr6:8928073-8946267 (-)
WSB/EiJ MGP_WSBEiJ_G0038718
pseudogene Chr6:8913994-8925879 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    4 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 625347 NCBI Gene Model | MGI Sequence Detail 10063 C57BL/6J ±  kb
    transcript NR_003631 RefSeq | MGI Sequence Detail 1001 Not Specified  
    For the selected sequence
    Molecular
    Reagents
    less
    • All nucleic 1
      cDNA 1

      Microarray probesets 1
    References
    more
    • Summaries
      All 12
      Phenotypes 4
    • Earliest
      J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    last database update
    02/23/2021
    MGI 6.16
    The Jackson Laboratory