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Sox5os5 Gene Detail
Summary
  • Symbol
    Sox5os5
  • Name
    SRY (sex determining region Y)-box 5, opposite strand 5
  • Synonyms
    Gm7518
Location &
Maps
more
  • Sequence Map
    Chr6:144669291-144670633 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 77.03 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    47 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3643003
antisense lncRNA gene Chr6:144669291-144670633 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004390
antisense lncRNA gene Chr6:149672819-149674161 (+)
A/J MGP_AJ_G0004367
antisense lncRNA gene Chr6:143761258-143762600 (+)
AKR/J MGP_AKRJ_G0004349
antisense lncRNA gene Chr6:148049566-148050903 (+)
BALB/cJ MGP_BALBcJ_G0004353
antisense lncRNA gene Chr6:143522127-143523469 (+)
C3H/HeJ MGP_C3HHeJ_G0004302
antisense lncRNA gene Chr6:148067716-148069053 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004503
antisense lncRNA gene Chr6:153710519-153711861 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003963
antisense lncRNA gene Chr6:142516935-142518272 (+)
CAST/EiJ MGP_CASTEiJ_G0004262
antisense lncRNA gene Chr6:147681293-147682630 (+)
CBA/J MGP_CBAJ_G0004296
antisense lncRNA gene Chr6:159565790-159567131 (+)
DBA/2J MGP_DBA2J_G0004311
antisense lncRNA gene Chr6:142561857-142563194 (+)
FVB/NJ MGP_FVBNJ_G0004328
antisense lncRNA gene Chr6:141303501-141304842 (+)
LP/J MGP_LPJ_G0004390
antisense lncRNA gene Chr6:149769967-149771308 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004319
antisense lncRNA gene Chr6:163385816-163387157 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004500
antisense lncRNA gene Chr6:147878294-147879631 (+)
PWK/PhJ MGP_PWKPhJ_G0004215
antisense lncRNA gene Chr6:141064041-141065385 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004157
antisense lncRNA gene Chr6:146026929-146028260 (+)
WSB/EiJ MGP_WSBEiJ_G0004301
antisense lncRNA gene Chr6:148462805-148464146 (+)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086731 Ensembl Gene Model | MGI Sequence Detail 1343 C57BL/6J ±  kb
transcript ENSMUST00000152192 Ensembl | MGI Sequence Detail 207 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 5
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/22/2022
MGI 6.22
The Jackson Laboratory