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Gm5551 Pseudogene Detail
Summary
  • Symbol
    Gm5551
  • Name
    predicted gene 5551
  • Feature Type
    pseudogene
  • IDs
    MGI:3642937
    NCBI Gene: 433862
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:28065447-28066136 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 13.32 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    67 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3642937
 pseudogene Chr5:28065438-28066164 (+)
129S1/SvImJ MGP_129S1SvImJ_G0010997
 pseudogene Chr13:23111983-23112674 (-)
A/J MGP_AJ_G0011001
 pseudogene Chr13:22679002-22679693 (-)
AKR/J MGP_AKRJ_G0010954
 pseudogene Chr13:22932250-22932941 (-)
BALB/cJ MGP_BALBcJ_G0010974
 pseudogene Chr13:22647175-22647866 (-)
C3H/HeJ MGP_C3HHeJ_G0010873
 pseudogene Chr13:22993481-22994172 (-)
C57BL/6NJ MGP_C57BL6NJ_G0013352
 pseudogene Chr5:27317361-27318050 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0010431
 pseudogene Chr2:46954208-46954766 (-)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0010846
 pseudogene Chr13:24825397-24826088 (-)
DBA/2J MGP_DBA2J_G0012891
 pseudogene Chr5:25105294-25105983 (+)
FVB/NJ MGP_FVBNJ_G0012896
 pseudogene Chr5:24554015-24554703 (+)
LP/J MGP_LPJ_G0010979
 pseudogene Chr13:23389546-23390237 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0012911
 pseudogene Chr5:28872053-28872741 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0011234
 pseudogene Chr13:22768411-22769102 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0010744
 pseudogene Chr13:22937465-22939342 (-)



Homology
less
Human Diseases
less
  • References
    2 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    14 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    2
  • Radiation induced
    3
  • Spontaneous
    1
  • Genomic Mutations
    6 involving Gm5551
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    19
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000106390 Ensembl Gene Model | MGI Sequence Detail 690 C57BL/6J ±  kb
transcript ENSMUST00000199720 Ensembl | MGI Sequence Detail 690 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 19
    Diseases 2
    Phenotypes 14
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:119563 Alt B, et al., Arteries define the position of the thyroid gland during its developmental relocalisation. Development. 2006 Oct;133(19):3797-804
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory