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Gm10544 Gene Detail
Summary
  • Symbol
    Gm10544
  • Name
    predicted gene 10544
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3642892
    NCBI Gene: 100038509
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:37292907-37311771 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 19.46 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    235 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3642892
 lncRNA gene Chr18:37292907-37311771 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015360
 unclassified non-coding RNA gene Chr18:35555423-35574102 (-)
A/J MGP_AJ_G0015334
 unclassified non-coding RNA gene Chr18:34329702-34348361 (-)
AKR/J MGP_AKRJ_G0015298
 unclassified non-coding RNA gene Chr18:35285583-35304258 (-)
BALB/cJ MGP_BALBcJ_G0015298
 unclassified non-coding RNA gene Chr18:34378547-34397208 (-)
C3H/HeJ MGP_C3HHeJ_G0015122
 unclassified non-coding RNA gene Chr18:35330329-35349009 (-)
C57BL/6NJ MGP_C57BL6NJ_G0015752
 unclassified non-coding RNA gene Chr18:36839845-36858513 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013493
 unclassified non-coding RNA gene Chr18:34408177-34426988 (-)
CAST/EiJ MGP_CASTEiJ_G0014673
 unclassified non-coding RNA gene Chr18:35328303-35346934 (-)
CBA/J MGP_CBAJ_G0015101
 unclassified non-coding RNA gene Chr18:37918063-37936724 (-)
DBA/2J MGP_DBA2J_G0015196
 unclassified non-coding RNA gene Chr18:33935909-33954570 (-)
FVB/NJ MGP_FVBNJ_G0015203
 unclassified non-coding RNA gene Chr18:33661747-33680422 (-)
LP/J MGP_LPJ_G0015276
 unclassified non-coding RNA gene Chr18:35649114-35667789 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015229
 unclassified non-coding RNA gene Chr18:39191083-39209751 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0015791
 unclassified non-coding RNA gene Chr18:35152790-35171478 (-)
PWK/PhJ MGP_PWKPhJ_G0014463
 unclassified non-coding RNA gene Chr18:34172970-34194295 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014250
 unclassified non-coding RNA gene Chr18:35413945-35432598 (-)
WSB/EiJ MGP_WSBEiJ_G0014780
 unclassified non-coding RNA gene Chr18:35052491-35072574 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    6
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097430 Ensembl Gene Model | MGI Sequence Detail 18865 C57BL/6J ±  kb
transcript ENSMUST00000180516 Ensembl | MGI Sequence Detail 2239 Not Applicable  
polypeptide Q8C967 UniProt | EBI | MGI Sequence Detail 130 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 2
References
more
  • Summaries
    All 11
    Developmental Gene Expression 1
    Phenotypes 2
  • Earliest
    J:244163 Hasegawa S, et al., Distinct and Cooperative Functions for the Protocadherin-alpha, -beta and -gamma Clusters in Neuronal Survival and Axon Targeting. Front Mol Neurosci. 2016;9:155
  • Latest
    J:331893 Yang J, et al., Identifying key m(6)A-methylated lncRNAs and genes associated with neural tube defects via integrative MeRIP and RNA sequencing analyses. Front Genet. 2022;13:974357
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory