9130213A22Rik Gene Detail

Summary

• Symbol
  9130213A22Rik
• Name
  RIKEN cDNA 9130213A22 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:3642718
  NCBI Gene: 100038433
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:69010880-69013415 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 42.38 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  39 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642718	lncRNA gene	Chr11:69009606-69013729 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0018519	protein coding gene	Chr11:69525374-69527905 (-)
A/J	MGP_AJ_G0018488	protein coding gene	Chr11:66911520-66914055 (-)
AKR/J	MGP_AKRJ_G0018457	protein coding gene	Chr11:68914973-68917508 (-)
BALB/cJ	MGP_BALBcJ_G0018459	protein coding gene	Chr11:67233061-67235596 (-)
C3H/HeJ	MGP_C3HHeJ_G0018272	protein coding gene	Chr11:68931636-68934171 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0018911	protein coding gene	Chr11:71637263-71639798 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0016555	protein coding gene	Chr11:63851051-63853579 (-)
CAST/EiJ	MGP_CASTEiJ_G0017828	protein coding gene	Chr11:69168918-69171447 (-)
CBA/J	MGP_CBAJ_G0018246	protein coding gene	Chr11:74849917-74852452 (-)
DBA/2J	MGP_DBA2J_G0018355	protein coding gene	Chr11:66510209-66512730 (-)
FVB/NJ	MGP_FVBNJ_G0018345	protein coding gene	Chr11:66132305-66134840 (-)
LP/J	MGP_LPJ_G0018426	protein coding gene	Chr11:70112361-70114892 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0018368	protein coding gene	Chr11:75474328-75476863 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0018952	protein coding gene	Chr11:69160286-69162821 (-)
PWK/PhJ	MGP_PWKPhJ_G0017603	protein coding gene	Chr11:67147349-67149870 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0017391	protein coding gene	Chr11:68993204-68995718 (-)
WSB/EiJ	MGP_WSBEiJ_G0017881	protein coding gene	Chr11:68801065-68803600 (-)

Homology

• Gene Tree
  9130213A22Rik
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000097386 (Evidence)
• NCBI Gene
  100038433

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097386	Ensembl Gene Model | MGI Sequence Detail	2536	C57BL/6J
transcript	ENSMUST00000180487	Ensembl | MGI Sequence Detail	1581	Not Applicable
polypeptide	Q3V3T2	UniProt | EBI | MGI Sequence Detail	120	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 3

  cDNA 3

  
  

  Microarray probesets 1

References

• Summaries
  All 10
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;