About   Help   FAQ
Gm9962 Gene Detail
Summary
  • Symbol
    Gm9962
  • Name
    predicted gene 9962
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3642695
    NCBI Gene: 791383
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr7:57037020-57059689 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 33.52 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    239 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3642695
 lncRNA gene Chr7:57037020-57059689 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004458
 antisense lncRNA gene Chr7:58204794-58227453 (+)
A/J MGP_AJ_G0004437
 antisense lncRNA gene Chr7:57322826-57349684 (+)
AKR/J MGP_AKRJ_G0004420
 antisense lncRNA gene Chr7:58649840-58672510 (+)
BALB/cJ MGP_BALBcJ_G0004422
 antisense lncRNA gene Chr7:56908819-56931932 (+)
C3H/HeJ MGP_C3HHeJ_G0004372
 antisense lncRNA gene Chr7:58996488-59019083 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004573
 antisense lncRNA gene Chr7:60838964-60863329 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004028
 antisense lncRNA gene Chr7:59894051-59916448 (+)
CAST/EiJ MGP_CASTEiJ_G0004332
 antisense lncRNA gene Chr7:50172514-50195306 (+)
CBA/J MGP_CBAJ_G0004366
 antisense lncRNA gene Chr7:62942519-62966232 (+)
DBA/2J MGP_DBA2J_G0004380
 antisense lncRNA gene Chr7:56318121-56340473 (+)
FVB/NJ MGP_FVBNJ_G0004398
 antisense lncRNA gene Chr7:56260618-56283355 (+)
LP/J MGP_LPJ_G0004461
 antisense lncRNA gene Chr7:59316033-59343480 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004389
 antisense lncRNA gene Chr7:62527601-62550970 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004571
 antisense lncRNA gene Chr7:57648377-57672794 (+)
PWK/PhJ MGP_PWKPhJ_G0004285
 antisense lncRNA gene Chr7:49535591-49558077 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004226
 antisense lncRNA gene Chr7:45688761-45712889 (+)
WSB/EiJ MGP_WSBEiJ_G0004371
 antisense lncRNA gene Chr7:58253727-58277336 (+)



Homology
less
Human Diseases
less
  • References
    4 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    30 phenotype references
  • All Mutations and Alleles
    3
  • Radiation induced
    1
  • Targeted
    1
  • Transgenic
    1
  • Genomic Mutations
    3 involving Gm9962
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    2 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 791383 NCBI Gene Model | MGI Sequence Detail 22670 C57BL/6J ±  kb
transcript NR_033504 RefSeq | MGI Sequence Detail 1417 C57BL/6  
polypeptide Q8C7L6 UniProt | EBI | MGI Sequence Detail 107 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 38
    Diseases 4
    Phenotypes 30
  • Earliest
    J:56614 Gabriel JM, et al., A transgene insertion creating a heritable chromosome deletion mouse model of Prader-Willi and angelman syndromes. Proc Natl Acad Sci U S A. 1999 Aug 3;96(16):9258-63
  • Latest
    J:335224 Nakai N, et al., Virtual reality-based real-time imaging reveals abnormal cortical dynamics during behavioral transitions in a mouse model of autism. Cell Rep. 2023 Mar 24;:112258
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory