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Gm9889 Gene Detail
Summary
  • Symbol
    Gm9889
  • Name
    predicted gene 9889
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3642568
    NCBI Gene: 791369
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:115715150-115716728 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 50.00 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    51 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3642568
lncRNA gene Chr3:115715150-115716728 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006280
lincRNA gene Chr3:117578287-117579863 (+)
A/J MGP_AJ_G0006273
lincRNA gene Chr3:113734539-113736117 (+)
AKR/J MGP_AKRJ_G0006249
lincRNA gene Chr3:116597590-116599168 (+)
BALB/cJ MGP_BALBcJ_G0006247
lincRNA gene Chr3:113586032-113587610 (+)
C3H/HeJ MGP_C3HHeJ_G0006199
lincRNA gene Chr3:116973404-116974982 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006412
lincRNA gene Chr3:121906608-121908186 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005708
lincRNA gene Chr3:109447886-109449437 (+)
CAST/EiJ MGP_CASTEiJ_G0006132
lincRNA gene Chr3:116239224-116240805 (+)
CBA/J MGP_CBAJ_G0006182
lincRNA gene Chr3:126062578-126064156 (+)
DBA/2J MGP_DBA2J_G0006204
lincRNA gene Chr3:112977331-112978909 (+)
FVB/NJ MGP_FVBNJ_G0006225
lincRNA gene Chr3:110623260-110624833 (+)
LP/J MGP_LPJ_G0006285
lincRNA gene Chr3:119118385-119119961 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006216
lincRNA gene Chr3:133442396-133443973 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006418
lincRNA gene Chr3:116154903-116156481 (+)
PWK/PhJ MGP_PWKPhJ_G0006071
lincRNA gene Chr3:112608381-112610007 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005983
lincRNA gene Chr3:114163874-114165470 (+)
WSB/EiJ MGP_WSBEiJ_G0006180
lincRNA gene Chr3:116832231-116833809 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000052769 Ensembl Gene Model | MGI Sequence Detail 1579 C57BL/6J ±  kb
transcript ENSMUST00000064809 Ensembl | MGI Sequence Detail 1579 Not Applicable  
polypeptide Q8BYT7 UniProt | EBI | MGI Sequence Detail 101 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 10
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
02/11/2020
MGI 6.14
The Jackson Laboratory