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Rtraf-ps Pseudogene Detail
Summary
  • Symbol
    Rtraf-ps
  • Name
    RNA transcription, translation and transport factor, pseudogene
  • Feature Type
    pseudogene
  • IDs
    MGI:3642446
    NCBI Gene: 545536
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr3:88576410-88577139 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 38.88 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3642446
pseudogene Chr3:88576237-88577203 (-)
129S1/SvImJ MGP_129S1SvImJ_G0012263
pseudogene Chr3:88745890-88746578 (-)
A/J MGP_AJ_G0012256
pseudogene Chr3:85752501-85753230 (-)
AKR/J MGP_AKRJ_G0012224
pseudogene Chr3:87866351-87867022 (-)
BALB/cJ MGP_BALBcJ_G0012239
pseudogene Chr3:85837660-85838349 (-)
C3H/HeJ MGP_C3HHeJ_G0012108
pseudogene Chr3:88124679-88127149 (-)
C57BL/6NJ MGP_C57BL6NJ_G0012552
pseudogene Chr3:92049389-92050142 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0012320
pseudogene Chr8:50388293-50389095 (-)
CAST/EiJ MGP_CASTEiJ_G0013531
pseudogene Chr8:56512797-56513507 (-)
CBA/J MGP_CBAJ_G0012084
pseudogene Chr3:95215129-95218129 (-)
DBA/2J MGP_DBA2J_G0012141
pseudogene Chr3:85236101-85237426 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0012211
pseudogene Chr3:89758357-89759498 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0012146
pseudogene Chr3:101425481-101426152 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0012557
pseudogene Chr3:87614318-87615007 (-)
PWK/PhJ MGP_PWKPhJ_G0011728
pseudogene Chr3:85015404-85016133 (-)
SPRET/EiJ MGP_SPRETEiJ_G0013123
pseudogene Chr8:55578762-55579472 (-)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Expression
less
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000074479 Ensembl Gene Model | MGI Sequence Detail 730 C57BL/6J ±  kb
transcript ENSMUST00000098952 Ensembl | MGI Sequence Detail 730 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 9
    Phenotypes 5
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory