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Gm9898 Gene Detail
Summary
  • Symbol
    Gm9898
  • Name
    predicted gene 9898
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3642391
    NCBI Gene: 791350
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr1:30718560-30719962 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 11.44 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    39 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3642391
lncRNA gene Chr1:30718560-30719962 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004790
lincRNA gene Chr1:28907359-28908762 (-)
A/J MGP_AJ_G0004771
lincRNA gene Chr1:28242844-28244247 (-)
AKR/J MGP_AKRJ_G0004750
lincRNA gene Chr1:28534061-28535463 (-)
BALB/cJ MGP_BALBcJ_G0004753
lincRNA gene Chr1:27979548-27980950 (-)
C3H/HeJ MGP_C3HHeJ_G0004701
lincRNA gene Chr1:28704620-28706023 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004903
lincRNA gene Chr1:30269731-30271133 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004336
lincRNA gene Chr1:25682618-25684024 (-)
CAST/EiJ MGP_CASTEiJ_G0004657
lincRNA gene Chr1:28638408-28639810 (-)
CBA/J MGP_CBAJ_G0004694
lincRNA gene Chr1:31038557-31039960 (-)
DBA/2J MGP_DBA2J_G0004712
lincRNA gene Chr1:27677886-27679289 (-)
FVB/NJ MGP_FVBNJ_G0004732
lincRNA gene Chr1:27239332-27240735 (-)
LP/J MGP_LPJ_G0004791
lincRNA gene Chr1:29223715-29225118 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004717
lincRNA gene Chr1:33165271-33166674 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004907
lincRNA gene Chr1:28522848-28524251 (-)
PWK/PhJ MGP_PWKPhJ_G0004609
lincRNA gene Chr1:27357396-27358797 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004537
lincRNA gene Chr1:28613901-28615309 (-)
WSB/EiJ MGP_WSBEiJ_G0004699
lincRNA gene Chr1:28475911-28477313 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000053185 Ensembl Gene Model | MGI Sequence Detail 1403 C57BL/6J ±  kb
transcript ENSMUST00000065469 Ensembl | MGI Sequence Detail 1161 Not Applicable  
polypeptide Q8C325 UniProt | EBI | MGI Sequence Detail 103 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 2
References
more
  • Summaries
    All 12
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
07/29/2020
MGI 6.15
The Jackson Laboratory