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Krtap12-20 Gene Detail
Summary
  • Symbol
    Krtap12-20
  • Name
    keratin associated protein 12-20
  • Synonyms
    Gm10100
  • Feature Type
    protein coding gene
  • IDs
    MGI:3642388
    NCBI Gene: 100502953
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:77562320-77562682 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 39.72 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    11 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3642388
 protein coding gene Chr10:77562286-77562682 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017407
 protein coding gene Chr10:78071608-78071970 (+)
A/J MGP_AJ_G0017383
 protein coding gene Chr10:75350992-75351354 (+)
AKR/J MGP_AKRJ_G0017345
 protein coding gene Chr10:77361042-77361404 (+)
BALB/cJ MGP_BALBcJ_G0017344
 protein coding gene Chr10:75545151-75545513 (+)
C3H/HeJ MGP_C3HHeJ_G0017168
 protein coding gene Chr10:77444715-77445077 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017802
 protein coding gene Chr10:80820759-80821121 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015491
 protein coding gene Chr10:71782963-71783355 (+)
CAST/EiJ MGP_CASTEiJ_G0016738
 protein coding gene Chr10:77811438-77811800 (+)
CBA/J MGP_CBAJ_G0017140
 protein coding gene Chr10:83919819-83920181 (+)
DBA/2J MGP_DBA2J_G0017245
 protein coding gene Chr10:74626752-74627114 (+)
FVB/NJ MGP_FVBNJ_G0017237
 protein coding gene Chr10:73804687-73805049 (+)
LP/J MGP_LPJ_G0017318
 protein coding gene Chr10:78532533-78532895 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017266
 protein coding gene Chr10:85955848-85956210 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017841
 protein coding gene Chr10:77452511-77452873 (+)
PWK/PhJ MGP_PWKPhJ_G0016521
 protein coding gene Chr10:74510942-74511304 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016305
 protein coding gene Chr10:76703377-76703739 (+)
WSB/EiJ MGP_WSBEiJ_G0016800
 protein coding gene Chr10:77423801-77424163 (+)



Homology
more
  • Human Ortholog
    KRTAP12-2, keratin associated protein 12-2
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KRTAP12-2, keratin associated protein 12-2
  • Synonyms
    KAP12.2, KRTAP12.2
  • Links
    NCBI Gene ID: 353323
    neXtProt AC: NX_P59991
    UniProt: P59991

  • Chr Location
    21q22.3; chr21:44666189-44666927 (-)  GRCh38
  • Human Ortholog
    KRTAP12-3, keratin associated protein 12-3
  • Synonyms
    KRTAP12.3
  • Links
    NCBI Gene ID: 386683
    neXtProt AC: NX_P60328
    UniProt: P60328

  • Chr Location
    21q22.3; chr21:44657932-44658341 (+)  GRCh38
Human Diseases
less
  • References
    2 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    26 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000096421 Ensembl Gene Model | MGI Sequence Detail 363 C57BL/6J ±  kb
transcript ENSMUST00000179726 Ensembl | MGI Sequence Detail 363 Not Applicable  
polypeptide ENSMUSP00000137358 Ensembl | MGI Sequence Detail 120 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR002494 Keratin-associated protein
References
more
  • Summaries
    All 35
    Diseases 2
    Gene Ontology 1
    Phenotypes 26
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:341136 Muza PM, et al., Cognitive impairments in a Down syndrome model with abnormal hippocampal and prefrontal dynamics and cytoarchitecture. iScience. 2023 Feb 17;26(2):106073
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory