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Igkv11-125 Gene Detail
Summary
  • Symbol
    Igkv11-125
  • Name
    immunoglobulin kappa variable 11-125
  • Synonyms
    ENSMUSG00000050218
  • Feature Type
    gene segment
  • IDs
    MGI:3642338
    NCBI Gene: 243428
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:67913573-67914052 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 31.01 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    48 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3642338
gene segment Chr6:67913573-67914052 (+)
129S1/SvImJ MGP_129S1SvImJ_G0000115
gene segment Chr6:68021371-68021850 (+)
A/J MGP_AJ_G0000107
gene segment Chr6:65108458-65108937 (+)
AKR/J MGP_AKRJ_G0000114
gene segment Chr6:67137259-67137738 (+)
BALB/cJ MGP_BALBcJ_G0000102
gene segment Chr6:65473332-65473811 (+)
C3H/HeJ MGP_C3HHeJ_G0000149
gene segment Chr6:117041928-117042407 (-)
C57BL/6NJ MGP_C57BL6NJ_G0000154
gene segment Chr6:69641515-69641994 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0000068
gene segment Chr6:64819860-64820336 (+)
CAST/EiJ MGP_CASTEiJ_G0000116
gene segment Chr6:67401625-67402104 (+)
CBA/J MGP_CBAJ_G0000108
gene segment Chr6:72479210-72479689 (+)
DBA/2J MGP_DBA2J_G0000104
gene segment Chr6:64781139-64781618 (+)
FVB/NJ MGP_FVBNJ_G0000102
gene segment Chr6:64223096-64223575 (+)
LP/J MGP_LPJ_G0000120
gene segment Chr6:67921832-67922311 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0000118
gene segment Chr6:76219466-76219945 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0000138
gene segment Chr6:67127238-67127717 (+)
PWK/PhJ MGP_PWKPhJ_G0000102
gene segment Chr6:63690197-63690676 (+)
SPRET/EiJ MGP_SPRETEiJ_G0000078
gene segment Chr6:66577497-66577975 (+)
WSB/EiJ MGP_WSBEiJ_G0000113
gene segment Chr6:67331633-67332109 (+)



Homology
less
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 243428 NCBI Gene Model | MGI Sequence Detail 480 C57BL/6J ±  kb
polypeptide P01650 UniProt | EBI | MGI Sequence Detail 108 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    3 Sequences
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 10
    Gene Ontology 1
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory