Gm9791 Pseudogene Detail

Summary

• Symbol
  Gm9791
• Name
  predicted pseudogene 9791

• Feature Type
  pseudogene
• IDs
  MGI:3642317
  NCBI Gene: 100040232
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:34059166-34059612 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 16.41 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  17 from dbSNP Build 142
• Strain Annotations
  8

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642317	pseudogene	Chr3:34058921-34059660 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011229	pseudogene	Chr16:5329392-5332783 (-)
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0012361	pseudogene	Chr3:33224388-33224834 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010062	pseudogene	Chr16:5214811-5218185 (-)
CAST/EiJ	MGP_CASTEiJ_G0010906	pseudogene	Chr16:5350018-5353469 (-)
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0011204	pseudogene	Chr16:5303449-5306851 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0010781	pseudogene	Chr16:5234713-5238187 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010605	pseudogene	Chr16:5299103-5302572 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm9791
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm9791
• Find Mice (IMSR)
  4 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  12
• RefSeq
  1

• Ensembl
  ENSMUSG00000044434 (Evidence)
• NCBI Gene
  100040232

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000044434	Ensembl Gene Model | MGI Sequence Detail	447	C57BL/6J
transcript	ENSMUST00000060997	Ensembl | MGI Sequence Detail	447	Not Applicable

References

• Summaries
  All 6

  Diseases 1

  Phenotypes 2
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Gm9791:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr32967	Chr3:34059639-34059663 (-)	-39 bp