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Igkv8-28 Gene Detail
Summary
  • Symbol
    Igkv8-28
  • Name
    immunoglobulin kappa variable 8-28
  • Synonyms
    ENSMUSG00000073023
  • Feature Type
    gene segment
  • IDs
    MGI:3642251
    NCBI Gene: 434040
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr6:70143593-70144161 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 31.78 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    25 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3642251
gene segment Chr6:70143593-70144166 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0000151
gene segment Chr6:67707838-67708357 (-)
AKR/J MGP_AKRJ_G0000151
gene segment Chr6:69779058-69779362 (-)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0000106
gene segment Chr6:114458249-114458553 (+)
C57BL/6NJ MGP_C57BL6NJ_G0000206
gene segment Chr6:72263008-72263581 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0000082
gene segment Chr6:67232116-67232694 (-)
CAST/EiJ MGP_CASTEiJ_G0000156
gene segment Chr6:69699580-69699876 (+)
CBA/J MGP_CBAJ_G0000148
gene segment Chr6:75187180-75187484 (-)
DBA/2J MGP_DBA2J_G0000142
gene segment Chr6:67205146-67205450 (-)
FVB/NJ MGP_FVBNJ_G0000140
gene segment Chr6:66558508-66559040 (-)
LP/J MGP_LPJ_G0000173
gene segment Chr6:70349298-70352180 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0000188
gene segment Chr6:69594900-69595473 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0000108
gene segment Chr6:68455669-68456246 (-)
WSB/EiJ MGP_WSBEiJ_G0000148
gene segment Chr6:69894464-69895041 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 434040 NCBI Gene Model | MGI Sequence Detail 569 C57BL/6J ±  kb
polypeptide A0A0G2JE47 UniProt | EBI | MGI Sequence Detail 121 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR003599 Immunoglobulin subtype
    IPR013106 Immunoglobulin V-set domain
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 9
    Gene Ontology 1
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
07/16/2019
MGI 6.14
The Jackson Laboratory