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Trpc5os Gene Detail
Summary
  • Symbol
    Trpc5os
  • Name
    transient receptor potential cation channel, subfamily C, member 5, opposite strand
  • Synonyms
    ENSMUSG00000072934, Gm15070
  • Feature Type
    protein coding gene
  • IDs
    MGI:3641805
    NCBI Gene: 100503240
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:143239577-143260062 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 65.58 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    50 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3641805
protein coding gene ChrX:143238872-143260062 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004745
antisense lncRNA gene ChrX:142017374-142039714 (+)
A/J MGP_AJ_G0004723
antisense lncRNA gene ChrX:141326316-141349519 (+)
AKR/J MGP_AKRJ_G0004706
antisense lncRNA gene ChrX:145945489-145967315 (+)
BALB/cJ MGP_BALBcJ_G0004707
antisense lncRNA gene ChrX:139571074-139591518 (+)
C3H/HeJ MGP_C3HHeJ_G0004655
antisense lncRNA gene ChrX:142115566-142136021 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004857
antisense lncRNA gene ChrX:146036413-146056165 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004293
antisense lncRNA gene ChrX:132897735-132918416 (+)
CAST/EiJ MGP_CASTEiJ_G0004612
antisense lncRNA gene ChrX:122766940-122789899 (+)
CBA/J MGP_CBAJ_G0004649
antisense lncRNA gene ChrX:150535701-150555832 (+)
DBA/2J MGP_DBA2J_G0004665
antisense lncRNA gene ChrX:140420561-140441803 (+)
FVB/NJ MGP_FVBNJ_G0004683
antisense lncRNA gene ChrX:139629405-139650244 (+)
LP/J MGP_LPJ_G0004746
antisense lncRNA gene ChrX:142964540-142987009 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0004857
antisense lncRNA gene ChrX:141322029-141342695 (+)
PWK/PhJ MGP_PWKPhJ_G0004563
antisense lncRNA gene ChrX:119552704-119573496 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004497
antisense lncRNA gene ChrX:123315607-123344113 (+)
WSB/EiJ MGP_WSBEiJ_G0004655
antisense lncRNA gene ChrX:139663397-139684259 (+)



Homology
more
  • Human Ortholog
    TRPC5OS, TRPC5 opposite strand
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources

Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000072934 Ensembl Gene Model | MGI Sequence Detail 20486 C57BL/6J ±  kb
transcript ENSMUST00000155206 Ensembl | MGI Sequence Detail 3585 Not Applicable  
polypeptide ENSMUSP00000148184 Ensembl | MGI Sequence Detail 110 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 10
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 2/14/1995;
  • Latest
    J:155721 Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI), Consensus CDS project. Database Download. 2010;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/23/2022
MGI 6.20
The Jackson Laboratory