F830112A20Rik Gene Detail

Summary

• Symbol
  F830112A20Rik
• Name
  RIKEN cDNA F830112A20 gene

• Feature Type
  protein coding gene
• IDs
  MGI:3641781
  NCBI Gene: 100038576
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:36961878-36965429 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  51 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3641781	protein coding gene	Chr1:36961878-36965429 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0000412	unclassified gene	Chr1:35493424-35496975 (-)
A/J	MGP_AJ_G0000385	unclassified gene	Chr1:34533053-34536714 (-)
AKR/J	MGP_AKRJ_G0000373	unclassified gene	Chr1:35016634-35020185 (-)
BALB/cJ	MGP_BALBcJ_G0000378	unclassified gene	Chr1:34216688-34220240 (-)
C3H/HeJ	MGP_C3HHeJ_G0000363	unclassified gene	Chr1:35221791-35225471 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0000493	unclassified gene	Chr1:37081884-37085435 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000252	unclassified gene	Chr1:31574871-31578383 (-)
CAST/EiJ	MGP_CASTEiJ_G0000359	unclassified gene	Chr1:35106917-35110597 (-)
CBA/J	MGP_CBAJ_G0000355	unclassified gene	Chr1:38073586-38077137 (-)
DBA/2J	MGP_DBA2J_G0000360	unclassified gene	Chr1:33865631-33869302 (-)
FVB/NJ	MGP_FVBNJ_G0000372	unclassified gene	Chr1:33390724-33394275 (-)
LP/J	MGP_LPJ_G0000417	unclassified gene	Chr1:35856313-35859864 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0000373	unclassified gene	Chr1:40267991-40272610 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0000488	unclassified gene	Chr1:35065871-35069422 (-)
PWK/PhJ	MGP_PWKPhJ_G0000314	unclassified gene	Chr1:33625350-33628893 (-)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0000364	unclassified gene	Chr1:35023749-35027285 (-)

Homology

• Gene Tree
  F830112A20Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving F830112A20Rik
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• UniProt
  1

• Ensembl
  ENSMUSG00000103159 (Evidence)
• NCBI Gene
  100038576

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103159	Ensembl Gene Model | MGI Sequence Detail	3552	C57BL/6J
transcript	AK172270	GenBank | ENA | DDBJ | MGI Sequence Detail	3681	NOD
polypeptide	Q3T9V5	UniProt | EBI | MGI Sequence Detail	52	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;