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Rsph3b Gene Detail
Summary
  • Symbol
    Rsph3b
  • Name
    radial spoke 3B homolog (Chlamydomonas)
  • Synonyms
    Rshl2b
  • Feature Type
    protein coding gene
  • IDs
    MGI:3630308
    NCBI Gene: 100037282
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:6904716-6948356 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 4.51 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    74 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3630308
protein coding gene Chr17:6904716-6948356 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023123
protein coding gene Chr17:5197249-5230854 (+)
A/J MGP_AJ_G0023087
protein coding gene Chr17:4107529-4193600 (-)
AKR/J MGP_AKRJ_G0023054
protein coding gene Chr17:4208119-4285264 (-)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0022859
protein coding gene Chr17:5366525-5421232 (+)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0021036
protein coding gene Chr17:3426383-3460607 (-)
CAST/EiJ MGP_CASTEiJ_G0022370
protein coding gene Chr17:5175020-5208273 (+)
CBA/J MGP_CBAJ_G0022829
protein coding gene Chr17:5832459-5890106 (+)
DBA/2J MGP_DBA2J_G0022954
protein coding gene Chr17:4072845-4117186 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0023022
protein coding gene Chr17:4232701-4277077 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022954
protein coding gene Chr17:5590486-5625470 (+)
NZO/HlLtJ no annotation
PWK/PhJ MGP_PWKPhJ_G0022118
protein coding gene Chr17:4699389-4726288 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021938
protein coding gene Chr17:3855382-3905590 (-)
WSB/EiJ MGP_WSBEiJ_G0022426
protein coding gene Chr17:5426411-5462494 (+)



Homology
more
  • Human Ortholog
    RSPH3, radial spoke head 3 homolog
  • Vertebrate Orthologs
    11
  • Human Ortholog
    RSPH3, radial spoke head 3 homolog
    Orthology source: HomoloGene
  • Synonyms
    CILD32, dJ111C20.1, RSHL2, RSP3
  • Links
    NCBI Gene ID: 83861
    neXtProt AC: NX_Q86UC2
    UniProt: Q86UC2

  • Chr Location
    6q25.3; chr6:158947012-159000432 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 12043
    1 human;2 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: RSPH3
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 100037282 NCBI Gene Model | MGI Sequence Detail 43641 C57BL/6J ±  kb
transcript NM_001083945 RefSeq | MGI Sequence Detail 1614 C57BL/6  
polypeptide Q9DA80 UniProt | EBI | MGI Sequence Detail 389 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 1
References
more
  • Summaries
    All 25
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 10
  • Earliest
    J:36910 You Y, et al., Chromosomal deletion complexes in mice by radiation of embryonic stem cells. Nat Genet. 1997 Mar;15(3):285-8
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory