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Mir680-1 Gene Detail
Summary
  • Symbol
    Mir680-1
  • Name
    microRNA 680-1
  • Synonyms
    mir 680-1, Mirn680-1, mmu-mir-680-1
Location &
Maps
more
  • Sequence Map
    Chr6:129668498-129668606 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 63.44 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    67 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3629682
 miRNA gene Chr6:129668498-129668606 (+)
129S1/SvImJ ENSMUSG00200048355
 miRNA gene Chr6:126766199-126766307 (+)
A/J ENSMUSG00195032373
 miRNA gene Chr6:126175642-126175750 (+)
AKR/J ENSMUSG00220044018
 miRNA gene Chr6:125037212-125037320 (+)
BALB/cJ ENSMUSG00180039771
 miRNA gene Chr6:126512553-126512661 (+)
C3H/HeJ ENSMUSG00175040994
 miRNA gene Chr6:126192745-126192853 (+)
C57BL/6NJ ENSMUSG00215036437
 miRNA gene Chr6:126498772-126498880 (+)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005041434
 miRNA gene Chr6:126529369-126529477 (+)
CBA/J ENSMUSG00210017328
 miRNA gene Chr6:126212537-126212645 (+)
DBA/2J ENSMUSG00185045649
 miRNA gene Chr6:126910951-126911059 (+)
FVB/NJ ENSMUSG00205040677
 miRNA gene Chr6:125767832-125767940 (+)
JF1/MsJ ENSUMUG00000042885
 miRNA gene Chr6:125529125-125529233 (+)
JF1/MsJ ENSUMUG00000053636
 miRNA gene Chr1:140125065-140125170 (+)
LP/J no annotation
NOD/ShiLtJ ENSMUSG00190041758
 miRNA gene Chr6:125922636-125922744 (+)
NZO/HlLtJ ENSMUSG00225017410
 miRNA gene Chr6:130395941-130396049 (+)
NZO/HlLtJ ENSMUSG00225035805
 miRNA gene Chr18:59433539-59433648 (+)
PWK/PhJ ENSLUMG00010042597
 miRNA gene Chr6:124720568-124720676 (+)
SPRET/EiJ ENSMSPG00010042823
 miRNA gene Chr6:127462616-127462725 (+)
WSB/EiJ ENSIUOG00005048688
 miRNA gene Chr6:126641134-126641242 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    618
  • Tissues
    4
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 735268 NCBI Gene Model | MGI Sequence Detail 109 C57BL/6J ±  kb
transcript NR_030447 RefSeq | MGI Sequence Detail 109 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    Other 1
Other Database
Links
less
miRBase MI0004640
References
more
  • Summaries
    All 10
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 1
  • Earliest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
  • Latest
    J:174268 Prosser HM, et al., A resource of vectors and ES cells for targeted deletion of microRNAs in mice. Nat Biotechnol. 2011 Aug 7;29(9):840-5
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory