Mir684-2 Gene Detail

Summary

• Symbol
  Mir684-2
• Name
  microRNA 684-2
• Synonyms
  mir 684-2, Mirn684-2, mmu-mir-684-2

• Feature Type
  miRNA gene
• IDs
  MGI:3629642
  NCBI Gene: 735261
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:11134097-11134182 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 5.01 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  124 from dbSNP Build 142
• Strain Annotations
  118

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3629642	miRNA gene	Chr4:11134097-11134182 (+)
129S1/SvImJ	ENSMUSG00200049025	miRNA gene	Chr16:16992242-16992327 (-)
129S1/SvImJ	ENSMUSG00200052314	miRNA gene	Chr11:72074106-72074191 (-)
129S1/SvImJ	ENSMUSG00200013887	miRNA gene	Chr10:125860059-125860144 (+)
129S1/SvImJ	ENSMUSG00200028035	miRNA gene	Chr7:113511067-113511152 (+)
129S1/SvImJ	ENSMUSG00200035005	miRNA gene	ChrX:2319948-2320033 (+)
129S1/SvImJ	ENSMUSG00200049290	miRNA gene	Chr2:33273198-33273283 (+)
129S1/SvImJ	ENSMUSG00200001440	miRNA gene	Chr4:7771877-7771962 (+)
A/J	ENSMUSG00195047116	miRNA gene	Chr11:71945098-71945183 (-)
A/J	ENSMUSG00195018346	miRNA gene	Chr10:126329218-126329303 (+)
A/J	ENSMUSG00195042879	miRNA gene	ChrX:2342916-2343001 (+)
A/J	ENSMUSG00195003020	miRNA gene	Chr4:8207275-8207360 (+)
A/J	ENSMUSG00195042931	miRNA gene	Chr5:19540455-19540540 (+)
A/J	ENSMUSG00195025853	miRNA gene	Chr18:42606254-42606339 (-)
A/J	ENSMUSG00195042391	miRNA gene	Chr2:33375257-33375342 (+)
A/J	ENSMUSG00195038175	miRNA gene	Chr16:16549766-16549851 (-)
A/J	ENSMUSG00195028809	miRNA gene	Chr1:12075732-12075817 (-)
AKR/J	ENSMUSG00220032654	miRNA gene	Chr3:52497126-52497211 (-)
AKR/J	ENSMUSG00220045829	miRNA gene	Chr2:33488779-33488864 (+)
AKR/J	ENSMUSG00220047658	miRNA gene	Chr16:16867445-16867530 (-)
AKR/J	ENSMUSG00220012567	miRNA gene	Chr11:82412190-82412275 (-)
AKR/J	ENSMUSG00220006896	miRNA gene	Chr10:125931772-125931857 (+)
AKR/J	ENSMUSG00220030621	miRNA gene	Chr7:111460040-111460125 (+)
AKR/J	ENSMUSG00220049369	miRNA gene	Chr11:72167675-72167760 (-)
AKR/J	ENSMUSG00220001442	miRNA gene	Chr4:7962458-7962543 (+)
BALB/cJ	ENSMUSG00180050292	miRNA gene	Chr2:33381870-33381955 (+)
BALB/cJ	ENSMUSG00180045181	miRNA gene	Chr11:72140544-72140629 (-)
BALB/cJ	ENSMUSG00180012067	miRNA gene	Chr10:126314192-126314277 (+)
BALB/cJ	ENSMUSG00180032025	miRNA gene	ChrX:2319531-2319616 (+)
BALB/cJ	ENSMUSG00180014178	miRNA gene	Chr7:114700867-114700952 (+)
BALB/cJ	ENSMUSG00180004618	miRNA gene	Chr4:7733704-7733789 (+)
BALB/cJ	ENSMUSG00180043796	miRNA gene	Chr16:16791021-16791106 (-)
C3H/HeJ	ENSMUSG00175036376	miRNA gene	ChrX:2354598-2354683 (+)
C3H/HeJ	ENSMUSG00175006312	miRNA gene	Chr10:126304752-126304837 (+)
C3H/HeJ	ENSMUSG00175043507	miRNA gene	Chr11:72110872-72110957 (-)
C3H/HeJ	ENSMUSG00175017353	miRNA gene	Chr4:8251656-8251741 (+)
C3H/HeJ	ENSMUSG00175010809	miRNA gene	Chr11:3272283-3272368 (+)
C3H/HeJ	ENSMUSG00175047331	miRNA gene	Chr2:33361263-33361348 (+)
C3H/HeJ	ENSMUSG00175020203	miRNA gene	Chr7:115427786-115427871 (+)
C3H/HeJ	ENSMUSG00175050519	miRNA gene	Chr5:21338715-21338800 (+)
C57BL/6NJ	ENSMUSG00215047952	miRNA gene	Chr2:33415329-33415414 (+)
C57BL/6NJ	ENSMUSG00215042131	miRNA gene	ChrX:3018438-3018523 (+)
C57BL/6NJ	ENSMUSG00215043551	miRNA gene	Chr11:71733116-71733201 (-)
C57BL/6NJ	ENSMUSG00215024934	miRNA gene	Chr10:125920336-125920421 (+)
C57BL/6NJ	ENSMUSG00215039249	miRNA gene	Chr7:114707770-114707855 (+)
C57BL/6NJ	ENSMUSG00215030853	miRNA gene	Chr5:19974393-19974478 (+)
C57BL/6NJ	ENSMUSG00215004576	miRNA gene	Chr4:7878226-7878311 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007854	miRNA gene	Chr4:7175574-7175659 (+)
CAST/EiJ	ENSTCUG00005026429	miRNA gene	Chr4:7931569-7931653 (+)
CBA/J	ENSMUSG00210049677	miRNA gene	Chr5:20377997-20378082 (+)
CBA/J	ENSMUSG00210023903	miRNA gene	Chr7:115188855-115188940 (+)
CBA/J	ENSMUSG00210042436	miRNA gene	ChrX:2371474-2371559 (+)
CBA/J	ENSMUSG00210009504	miRNA gene	Chr10:126129055-126129140 (+)
CBA/J	ENSMUSG00210050338	miRNA gene	Chr2:33428223-33428308 (+)
CBA/J	ENSMUSG00210048757	miRNA gene	Chr16:16957881-16957966 (-)
CBA/J	ENSMUSG00210002592	miRNA gene	Chr4:7991375-7991460 (+)
DBA/2J	ENSMUSG00185031145	miRNA gene	ChrX:8988606-8988691 (+)
DBA/2J	ENSMUSG00185027935	miRNA gene	Chr10:126287275-126287360 (+)
DBA/2J	ENSMUSG00185042375	miRNA gene	Chr11:72199328-72199413 (-)
DBA/2J	ENSMUSG00185040870	miRNA gene	Chr2:15541255-15541340 (-)
DBA/2J	ENSMUSG00185049402	miRNA gene	Chr2:33288045-33288130 (+)
DBA/2J	ENSMUSG00185028970	miRNA gene	Chr3:52675168-52675253 (-)
DBA/2J	ENSMUSG00185002547	miRNA gene	Chr4:8100606-8100691 (+)
DBA/2J	ENSMUSG00185051607	miRNA gene	Chr7:119501697-119501782 (+)
FVB/NJ	ENSMUSG00205041413	miRNA gene	Chr2:33139828-33139913 (+)
FVB/NJ	ENSMUSG00205010299	miRNA gene	Chr3:51660270-51660355 (-)
FVB/NJ	ENSMUSG00205003608	miRNA gene	Chr4:7763119-7763204 (+)
FVB/NJ	ENSMUSG00205045529	miRNA gene	Chr7:115144635-115144720 (+)
FVB/NJ	ENSMUSG00205048699	miRNA gene	Chr11:72036271-72036356 (-)
FVB/NJ	ENSMUSG00205049146	miRNA gene	Chr16:16899096-16899181 (-)
FVB/NJ	ENSMUSG00205038477	miRNA gene	ChrX:2365234-2365319 (+)
FVB/NJ	ENSMUSG00205027454	miRNA gene	Chr10:125531215-125531300 (+)
JF1/MsJ	ENSUMUG00000008067	miRNA gene	Chr5:26473433-26473518 (+)
JF1/MsJ	ENSUMUG00000045427	miRNA gene	ChrX:22875347-22875614 (+)
JF1/MsJ	ENSUMUG00000031779	miRNA gene	Chr11:82815225-82815310 (-)
JF1/MsJ	ENSUMUG00000016584	miRNA gene	Chr2:33143648-33143733 (+)
JF1/MsJ	ENSUMUG00000002927	miRNA gene	Chr4:8201490-8201575 (+)
JF1/MsJ	ENSUMUG00000047764	miRNA gene	Chr10:127580443-127580528 (+)
JF1/MsJ	ENSUMUG00000054688	miRNA gene	Chr11:72592736-72592821 (-)
LP/J	ENSMUSG00230033930	miRNA gene	ChrX:13508831-13508916 (+)
LP/J	ENSMUSG00230047845	miRNA gene	Chr16:19475914-19475999 (-)
LP/J	ENSMUSG00230053424	miRNA gene	Chr7:125611009-125611094 (+)
LP/J	ENSMUSG00230048175	miRNA gene	Chr2:35208418-35208503 (+)
LP/J	ENSMUSG00230049948	miRNA gene	Chr11:73229987-73230072 (-)
LP/J	ENSMUSG00230034779	miRNA gene	Chr10:128230445-128230530 (+)
LP/J	ENSMUSG00230001320	miRNA gene	Chr4:11283393-11283478 (+)
NOD/ShiLtJ	ENSMUSG00190051876	miRNA gene	Chr16:17038165-17038250 (-)
NOD/ShiLtJ	ENSMUSG00190034437	miRNA gene	Chr1:12049059-12049144 (-)
NOD/ShiLtJ	ENSMUSG00190030618	miRNA gene	Chr18:42335663-42335748 (-)
NOD/ShiLtJ	ENSMUSG00190044792	miRNA gene	Chr2:33394795-33394880 (+)
NOD/ShiLtJ	ENSMUSG00190036376	miRNA gene	Chr3:52844830-52844915 (-)
NOD/ShiLtJ	ENSMUSG00190049116	miRNA gene	Chr11:72245799-72245884 (-)
NOD/ShiLtJ	ENSMUSG00190045010	miRNA gene	ChrX:2345790-2345875 (+)
NOD/ShiLtJ	ENSMUSG00190021099	miRNA gene	Chr7:115348376-115348461 (+)
NOD/ShiLtJ	ENSMUSG00190014458	miRNA gene	Chr4:7834779-7834864 (+)
NZO/HlLtJ	ENSMUSG00225040328	miRNA gene	Chr11:75402098-75402183 (-)
NZO/HlLtJ	ENSMUSG00225008560	miRNA gene	Chr4:15294345-15294430 (+)
NZO/HlLtJ	ENSMUSG00225013286	miRNA gene	Chr7:123841080-123841165 (+)
NZO/HlLtJ	ENSMUSG00225013375	miRNA gene	Chr10:132411856-132411941 (+)
NZO/HlLtJ	ENSMUSG00225050581	miRNA gene	Chr2:42971885-42971970 (+)
NZO/HlLtJ	ENSMUSG00225046547	miRNA gene	ChrX:18774337-18774422 (+)
NZO/HlLtJ	ENSMUSG00225039695	miRNA gene	Chr16:22721689-22721774 (-)
PWK/PhJ	ENSLUMG00010037264	miRNA gene	ChrX:2335990-2336075 (+)
PWK/PhJ	ENSLUMG00010023444	miRNA gene	Chr1:11905534-11905619 (-)
PWK/PhJ	ENSLUMG00010030250	miRNA gene	Chr1:126900696-126900781 (+)
PWK/PhJ	ENSLUMG00010010843	miRNA gene	Chr10:126044418-126044503 (+)
PWK/PhJ	ENSLUMG00010053737	miRNA gene	Chr11:72109170-72109255 (-)
PWK/PhJ	ENSLUMG00010036138	miRNA gene	Chr11:82314572-82314657 (-)
PWK/PhJ	ENSLUMG00010035827	miRNA gene	Chr2:15632200-15632285 (-)
PWK/PhJ	ENSLUMG00010006068	miRNA gene	Chr4:7680912-7680997 (+)
SPRET/EiJ	ENSMSPG00010003326	miRNA gene	Chr4:8037992-8038076 (+)
WSB/EiJ	ENSIUOG00005009625	miRNA gene	Chr3:52635896-52635981 (-)
WSB/EiJ	ENSIUOG00005043659	miRNA gene	Chr2:33274332-33274417 (+)
WSB/EiJ	ENSIUOG00005038348	miRNA gene	Chr11:72099602-72099687 (-)
WSB/EiJ	ENSIUOG00005014704	miRNA gene	Chr4:7771786-7771871 (+)
WSB/EiJ	ENSIUOG00005034589	miRNA gene	ChrX:16181908-16181993 (-)
WSB/EiJ	ENSIUOG00005009396	miRNA gene	Chr10:125942304-125942389 (+)
WSB/EiJ	ENSIUOG00005008120	miRNA gene	Chr11:3285151-3285236 (+)

Homology

• Gene Tree
  Mir684-2
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Find Mice (IMSR)
  1 strains or lines available

Gene Ontology
(GO)
Classifications

• All GO Annotations
  1
• GO References
  1

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  122
• RefSeq
  1

• Ensembl
  ENSMUSG00000105333 (Evidence)
• NCBI Gene
  735261

Representative Sequences			Length	Strain/Species
genomic	735261	NCBI Gene Model | MGI Sequence Detail	86	C57BL/6J
transcript	NR_030455	RefSeq | MGI Sequence Detail	86	C57BL/6

Molecular
Reagents

• All nucleic 1

  Other 1

Other Database
Links

miRBase

MI0004648

References

• Summaries
  All 9

  Gene Ontology 1

  Phenotypes 1
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
• Latest
  J:174268 Prosser HM, et al., A resource of vectors and ES cells for targeted deletion of microRNAs in mice. Nat Biotechnol. 2011 Aug 7;29(9):840-5