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Mir500 Gene Detail
Summary
  • Symbol
    Mir500
  • Name
    microRNA 500
  • Synonyms
    mir 500, Mirn500, miRNA402, mmu-mir-500
  • Feature Type
    miRNA gene
  • IDs
    MGI:3624341
    NCBI Gene: 723974
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:7103922-7104013 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 3.25 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    8 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3624341
miRNA gene ChrX:7103922-7104013 (-)
129S1/SvImJ MGP_129S1SvImJ_G0009253
miRNA gene ChrX:1826291-1826382 (-)
A/J MGP_AJ_G0009233
miRNA gene ChrX:1799813-1799904 (-)
AKR/J MGP_AKRJ_G0009223
miRNA gene ChrX:1882263-1882354 (-)
BALB/cJ MGP_BALBcJ_G0009217
miRNA gene ChrX:1827352-1827443 (-)
C3H/HeJ MGP_C3HHeJ_G0009157
miRNA gene ChrX:1871941-1872032 (-)
C57BL/6NJ MGP_C57BL6NJ_G0009460
miRNA gene ChrX:1902807-1902898 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0008308
miRNA gene ChrX:1374760-1374851 (-)
CAST/EiJ MGP_CASTEiJ_G0008987
miRNA gene ChrX:1760767-1760858 (-)
CBA/J MGP_CBAJ_G0009124
miRNA gene ChrX:2005592-2005683 (-)
DBA/2J MGP_DBA2J_G0009154
miRNA gene ChrX:1832007-1832098 (-)
FVB/NJ MGP_FVBNJ_G0009171
miRNA gene ChrX:1792466-1792557 (-)
LP/J MGP_LPJ_G0009251
miRNA gene ChrX:1834040-1834131 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0009138
miRNA gene ChrX:1970221-1970312 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0009430
miRNA gene ChrX:1819364-1819455 (-)
PWK/PhJ MGP_PWKPhJ_G0008913
miRNA gene ChrX:1754035-1754126 (-)
SPRET/EiJ MGP_SPRETEiJ_G0008750
miRNA gene ChrX:1773891-1773982 (-)
WSB/EiJ MGP_WSBEiJ_G0009082
miRNA gene ChrX:1828602-1828693 (-)



Homology
more
  • Human Ortholog
    MIR500A, microRNA 500a
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MIR500A, microRNA 500a
  • Synonyms
    hsa-mir-500, hsa-mir-500a, MIR500, mir-500a, MIRN500
  • Links
    NCBI Gene ID: 574502

  • Chr Location
    chrX:50008431-50008514 (+)  GRCh38.p7

  • Human Ortholog
    MIR500B, microRNA 500b
  • Synonyms
    mir-500b
  • Links
    NCBI Gene ID: 100422911

  • Chr Location
    chrX:50010672-50010750 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 723974 NCBI Gene Model | MGI Sequence Detail 92 C57BL/6J ±  kb
transcript NR_030495 RefSeq | MGI Sequence Detail 92 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    Other 3
Other Database
Links
less
References
more
  • Summaries
    All 15
    Developmental Gene Expression 2
    Gene Ontology 4
    Phenotypes 1
  • Earliest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
  • Latest
    J:232641 Rowley JW, et al., Dicer1-mediated miRNA processing shapes the mRNA profile and function of murine platelets. Blood. 2016 Apr 7;127(14):1743-51

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/30/2021
MGI 6.17
The Jackson Laboratory