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Mir10a
Gene Detail
 Symbol
Name
ID
Mir10a
microRNA 10a
MGI:3619064
BioType Conflict
Synonyms MicroRNA-10a, mir 10a, miR-10a, Mirn10a, mmu-mir-10a
Feature Type miRNA gene
Genetic Map
Chromosome 11
59.83 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr11:96317165-96317274 bp, + strand
From miRBase annotation of GRCm38

  110 bp   ±  kb flank

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Mouse Genome Browser
Vertebrate
homology
Gene Tree: Mir10a
Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Targeted(5)
Genomic Mutations involving Mir10a (2)
 
Mice homozygous for a targeted deletion are viable with no observed pathologies. Mice homozygous for a knock-out allele exhibit increased frequency with of high-grade dysplasia and higher incidence of tubule-villous adenomas in Apcmin heterozygotes.
 
Interactions
Mir10a interacts with 5438 markers (0610030E20Rik, 0610040J01Rik, 1110002E22Rik, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process cellular response to inorganic substance, cellular response to lipopolysaccharide, ...
Expression
Literature Summary: (7 records)
Data Summary: Results (7)    Tissues (5)    Images (3)
Theiler Stages: 15, 17, 22, 25
Assay TypeResults
RNA in situ 3
RT-PCR 4
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(3) Primer pair(1) Other(2)
Other database
links
Ensembl Gene ModelENSMUSG00000065519 (Evidence)
Entrez Gene723893 (Evidence)
miRBaseMI0000685
International Mouse Knockout Project StatusMir10a
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 723893 NCBI Gene Model | MGI Sequence Detail 110 C57BL/6J ±  kb
transcript NR_029784 RefSeq | MGI Sequence Detail 110 C57BL/6 

For the selected sequences
All sequences(4) RefSeq(1)
Polymorphisms SNPs within 2kb(6 from dbSNP Build 137)
References (Earliest) J:93952 Mansfield JH, et al., MicroRNA-responsive 'sensor' transgenes uncover Hox-like and other developmentally regulated patterns of vertebrate microRNA expression. Nat Genet. 2004 Oct;36(10):1079-83
(Latest) J:205135 Stadthagen G, et al., Loss of miR-10a activates lpo and collaborates with activated Wnt signaling in inducing intestinal neoplasia in female mice. PLoS Genet. 2013 Oct;9(10):e1003913
All references(22)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory