About   Help   FAQ
Mir196b Gene Detail
Summary
  • Symbol
    Mir196b
  • Name
    microRNA 196b
  • Synonyms
    mir 196b, Mirn196b, mmu-mir-196b
  • Feature Type
    miRNA gene
  • IDs
    MGI:3618741
    NCBI Gene: 723820
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:52207061-52207145 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 25.40 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    3 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3618741
miRNA gene Chr6:52207061-52207145 (-)
129S1/SvImJ MGP_129S1SvImJ_G0008904
miRNA gene Chr6:51471257-51471341 (-)
A/J MGP_AJ_G0008889
miRNA gene Chr6:49065916-49066000 (-)
AKR/J MGP_AKRJ_G0008879
miRNA gene Chr6:50772337-50772421 (-)
BALB/cJ MGP_BALBcJ_G0008877
miRNA gene Chr6:49426564-49426648 (-)
C3H/HeJ MGP_C3HHeJ_G0008816
miRNA gene Chr6:50781370-50781454 (-)
C57BL/6NJ MGP_C57BL6NJ_G0009106
miRNA gene Chr6:52607553-52607637 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0008026
miRNA gene Chr6:46713758-46713842 (-)
CAST/EiJ MGP_CASTEiJ_G0008659
miRNA gene Chr6:50596321-50596405 (-)
CBA/J MGP_CBAJ_G0008783
miRNA gene Chr6:54806723-54806807 (-)
DBA/2J MGP_DBA2J_G0008815
miRNA gene Chr6:48988338-48988422 (-)
FVB/NJ MGP_FVBNJ_G0008833
miRNA gene Chr6:48599915-48599999 (-)
LP/J MGP_LPJ_G0008908
miRNA gene Chr6:51449946-51450030 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0008798
miRNA gene Chr6:57436372-57436456 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0009083
miRNA gene Chr6:50701009-50701093 (-)
PWK/PhJ MGP_PWKPhJ_G0008586
miRNA gene Chr6:48612318-48612402 (-)
SPRET/EiJ MGP_SPRETEiJ_G0008430
miRNA gene Chr6:50036418-50036502 (-)
WSB/EiJ MGP_WSBEiJ_G0008755
miRNA gene Chr6:50717172-50717256 (-)



Homology
more
  • Human Ortholog
    MIR196B, microRNA 196b
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MIR196B, microRNA 196b
  • Synonyms
    miR-196b, MIRN196B, miRNA196B
  • Links
    NCBI Gene ID: 442920

  • Chr Location
    chr7:27169480-27169563 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    2 phenotypes from multigenic genotypes
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit anterior homeotic transformation with a rudimentary rib on the first lumbar vertebra and posterior displacement of the sacrum or anterior homeotic transformation of all sacral elements with posterior displacement of the sacrum.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 723820 NCBI Gene Model | MGI Sequence Detail 85 C57BL/6J ±  kb
transcript NR_029912 RefSeq | MGI Sequence Detail 85 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    Primer pair 1
    Other 2
Other Database
Links
less
References
more
  • Summaries
    All 24
    Developmental Gene Expression 5
    Gene Ontology 1
    Phenotypes 10
  • Earliest
    J:90106 Yekta S, et al., MicroRNA-directed cleavage of HOXB8 mRNA. Science. 2004 Apr 23;304(5670):594-6
  • Latest
    J:249193 Jeong JH, et al., A Constitutive Intrinsic Inflammatory Signaling Circuit Composed of miR-196b, Meis2, PPP3CC, and p65 Drives Prostate Cancer Castration Resistance. Mol Cell. 2017 Jan 5;65(1):154-167

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
09/07/2021
MGI 6.17
The Jackson Laboratory