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Pnpla1
Gene Detail
 Symbol
Name
ID
Pnpla1
patatin-like phospholipase domain containing 1
MGI:3617850
Feature Type protein coding gene
Genetic Map
Chromosome 17
15.03 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr17:28858411-28890308 bp, + strand
From VEGA annotation of GRCm38

  31898 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:25324  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken

Gene Tree: Pnpla1

Human
homologs
Human Homolog PNPLA1, patatin-like phospholipase domain containing 1
NCBI Gene ID 285848
neXtProt AC  NX_Q8N8W4
Human Synonyms  ARCI10, dJ50J22.1
Human Chr (Location)  6p21.31; chr6:36243168-36308595 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human PNPLA1
Alleles
and
phenotypes
All alleles(2) : Targeted(2)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process lipid catabolic process, lipid metabolic process, ...
Component cytoplasm
Function hydrolase activity
Expression
cDNA source data(9)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(9) cDNA(9)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000024254 (Evidence)
Ensembl Gene ModelENSMUSG00000043286 (Evidence)
Entrez Gene433091 (Evidence)
UniGene328925
DFCITC1588823
DoTSDT.55211228
NIA Mouse Gene IndexU118001
EC3.1.1.-
Consensus CDS ProjectCCDS37533.1
International Mouse Knockout Project StatusPnpla1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024254 VEGA Gene Model | MGI Sequence Detail 31898 C57BL/6J ±  kb
transcript OTTMUST00000059372 VEGA | MGI Sequence Detail 4483 Not Applicable 
polypeptide OTTMUSP00000028874 VEGA | MGI Sequence Detail 599 Not Applicable 

For the selected sequences
All sequences(32) RefSeq(14) UniProt(2)
Polymorphisms SNPs within 2kb(266 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase
InterPro IPR002641 Patatin/Phospholipase A2-related
Protein Ontology PR:000012941 patatin-like phospholipase domain-containing protein 1
References (Earliest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(28)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory