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Ogdhl
Gene Detail
 Symbol
Name
ID
Ogdhl
oxoglutarate dehydrogenase-like
MGI:3616088
Feature Type protein coding gene
Genetic Map
Chromosome 14
19.40 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr14:32322019-32347820 bp, + strand
From NCBI annotation of GRCm38

  25802 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:56801  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: 2-oxoglutarate dehydrogenase, E1 component
Gene Tree: Ogdhl

Human
homologs
Human Homolog OGDHL, oxoglutarate dehydrogenase-like
NCBI Gene ID 55753
neXtProt AC  NX_Q9ULD0
Human Chr (Location)  10q11.23; chr10:49734641-49762379 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(8) : Gene trapped(8)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Ogdhl interacts with 38 markers (Mir9-1, Mir9-2, Mir9-3, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
Expression
cDNA source data(9)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(9) cDNA(9)
Microarray probesets(1)
Other database
links
Ensembl Gene ModelENSMUSG00000021913 (Evidence)
Entrez Gene239017 (Evidence)
UniGene318302
DFCITC1648412, TC1693753
DoTSDT.110747680, DT.110777253, DT.94131242
NIA Mouse Gene IndexU015476
Consensus CDS ProjectCCDS36866.1
International Mouse Knockout Project StatusOgdhl
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 239017 NCBI Gene Model | MGI Sequence Detail 25802 C57BL/6J ±  kb
transcript NM_001081130 RefSeq | MGI Sequence Detail 3449 Not Specified 
polypeptide NP_001074599 RefSeq | MGI Sequence Detail 1029 Not Specified 

For the selected sequences
All sequences(23) RefSeq(6) UniProt(2)
Polymorphisms SNPs within 2kb(221 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR011603 2-oxoglutarate dehydrogenase, E1 component
InterPro IPR001017 Dehydrogenase, E1 component
InterPro IPR005475 Transketolase-like, pyrimidine-binding domain
Protein Ontology PR:000011613 2-oxoglutarate dehydrogenase-like, mitochondrial
References (Earliest) J:85162 Hansen J, et al., A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Proc Natl Acad Sci U S A. 2003 Aug 19;100(17):9918-22
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(25)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory