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Ogdhl
Gene Detail
Symbol

Name
ID
Ogdhl
oxoglutarate dehydrogenase-like
MGI:3616088
Feature Type
protein coding gene
Genetic Map
Chromosome 14
19.40 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr14:32322019-32347820 bp, + strand
From Ensembl annotation of GRCm38

  25802 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:56801  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: OGDHL
Protein SuperFamily: 2-oxoglutarate dehydrogenase, E1 component
Gene Tree: Ogdhl

Human
homologs
OGDHL, oxoglutarate dehydrogenase-like
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 55753
neXtProt AC: NX_Q9ULD0

Human Chr (Location): 10q11.23; chr10:49734641-49762379 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(8) : Gene trapped(8)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Ogdhl interacts with 37 markers (Mir9-1, Mir9-2, Mir9-3, ...)
Gene Ontology
(GO)
classifications
Expression
cDNA source data(9)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase ogdhl    NEW 
Molecular
reagents
All nucleic(9) cDNA(9)
Microarray probesets(1)
Other database
links
Ensembl Gene Model ENSMUSG00000021913 (Evidence)
Entrez Gene 239017 (Evidence)
UniGene 318302
DFCI TC1648412, TC1693753
DoTS DT.110747680, DT.110777253, DT.94131242
NIA Mouse Gene Index U015476
Consensus CDS Project CCDS36866.1
International Mouse Phenotyping Consortium Status Ogdhl
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000021913 Ensembl Gene Model | MGI Sequence Detail 25802 C57BL/6J ±  kb
transcript ENSMUST00000022480 Ensembl | MGI Sequence Detail 3449 Not Applicable 
polypeptide ENSMUSP00000022480 Ensembl | MGI Sequence Detail 1029 Not Applicable 

For the selected sequences
All sequences(23) RefSeq(6) UniProt(2)
Polymorphisms
SNPs within 2kb(221 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR011603 2-oxoglutarate dehydrogenase, E1 component
InterPro IPR001017 Dehydrogenase, E1 component
InterPro IPR005475 Transketolase-like, pyrimidine-binding domain
Protein Ontology PR:000011613 2-oxoglutarate dehydrogenase-like, mitochondrial
References
(Earliest) J:85162 Hansen J, et al., A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Proc Natl Acad Sci U S A. 2003 Aug 19;100(17):9918-22
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(24)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory