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Ly6g6f Gene Detail
Summary
  • Symbol
    Ly6g6f
  • Name
    lymphocyte antigen 6 complex, locus G6F
  • Feature Type
    protein coding gene
  • IDs
    MGI:3616082
    NCBI Gene: 433099
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:35080480-35085610 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 18.59 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3616082
protein coding gene Chr17:35080480-35086110 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023615
protein coding gene Chr17:35221786-35226914 (-)
A/J MGP_AJ_G0023575
protein coding gene Chr17:34054181-34059116 (-)
AKR/J MGP_AKRJ_G0023543
protein coding gene Chr17:34528757-34534025 (-)
BALB/cJ MGP_BALBcJ_G0023581
protein coding gene Chr17:34190933-34196329 (-)
C3H/HeJ MGP_C3HHeJ_G0023342
protein coding gene Chr17:34921602-34927751 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024020
protein coding gene Chr17:36559108-36565119 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021501
protein coding gene Chr17:31821958-31826989 (-)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0023320
protein coding gene Chr17:38064272-38069537 (-)
DBA/2J MGP_DBA2J_G0023448
protein coding gene Chr17:33375071-33380095 (-)
FVB/NJ MGP_FVBNJ_G0023415
protein coding gene Chr17:33212480-33217970 (-)
LP/J MGP_LPJ_G0023525
protein coding gene Chr17:35545965-35552608 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023437
protein coding gene Chr17:37002710-37007723 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024065
protein coding gene Chr17:34747959-34753044 (-)
PWK/PhJ MGP_PWKPhJ_G0022586
protein coding gene Chr17:32208068-32213590 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022406
protein coding gene Chr17:32758356-32763618 (-)
WSB/EiJ MGP_WSBEiJ_G0022902
protein coding gene Chr17:34867014-34871984 (-)



Homology
more
  • Human Ortholog
    LY6G6F, lymphocyte antigen 6 family member G6F
  • Vertebrate Orthologs
    7
  • Human Ortholog
    LY6G6F, lymphocyte antigen 6 family member G6F
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C6orf21, G6f, LY6G6, LY6G6D, NG32
  • Links
    NCBI Gene ID: 259215
    neXtProt AC: NX_Q5SQ64
    UniProt: Q5SQ64

  • Chr Location
    6p21.33; chr6:31706907-31710595 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000034923 Ensembl Gene Model | MGI Sequence Detail 5131 C57BL/6J ±  kb
transcript ENSMUST00000038507 Ensembl | MGI Sequence Detail 1141 Not Applicable  
polypeptide ENSMUSP00000046380 Ensembl | MGI Sequence Detail 300 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    5 Sequences
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR003599 Immunoglobulin subtype
    IPR013106 Immunoglobulin V-set domain
    IPR026524 Lymphocyte antigen 6 complex locus protein G6d/G6f
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Phenotypes 5
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
07/09/2019
MGI 6.14
The Jackson Laboratory