Ripply1
Gene Detail

Symbol Name ID

Ripply1 ripply1 homolog (zebrafish) MGI:3614797

Feature Type

protein coding gene

Genetic Map

Chromosome X

61.35 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)

Sequence Map

ChrX:139779549-139782353 bp, - strand From VEGA annotation of GRCm38   2805 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:82615  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Ripply1

Human homologs

Human Homolog		RIPPLY1, ripply1 homolog (zebrafish)
NCBI Gene ID		92129
neXtProt AC		NX_Q0D2K3
Human Chr (Location)		Xq22.3; chrX:106143293-106146561 (-)  GRCh37.p10

Alleles and phenotypes

All alleles(10) : Targeted(4) Gene trapped(6)
 

Mice homozygous for a knock-out allele exhibit extension of the seventh cervical vertebrae that fuses with the first rib. However, mice are otherwise viable.

 

Gene Ontology (GO) classifications

All GO classifications: (5 annotations)

Process	multicellular organismal development, regulation of transcription, DNA-dependent, ...
Component	nucleus
Function	molecular_function

Expression

Literature Summary: (2 records)
cDNA source data(1)
External Resources: GEO   ArrayExpress

Molecular reagents

All nucleic(2) cDNA(1) Other(1)
Microarray probesets(1)

Other database links

VEGA Gene Model	OTTMUSG00000018733 (Evidence)
Ensembl Gene Model	ENSMUSG00000072945 (Evidence)
Entrez Gene	622473 (Evidence)
UniGene	391312
DFCI	TC1596850
DoTS	DT.102551327
NIA Mouse Gene Index	U139866
Consensus CDS Project	CCDS30436.1
International Mouse Knockout Project Status	Ripply1

Sequences

Length	Strain/Species
genomic	OTTMUSG00000018733	VEGA Gene Model | MGI Sequence Detail	2805	C57BL/6J
transcript	OTTMUST00000045067	VEGA | MGI Sequence Detail	811	Not Applicable
polypeptide	OTTMUSP00000020256	VEGA | MGI Sequence Detail	201	Not Applicable

All sequences(15) RefSeq(2) UniProt(1)

Polymorphisms

SNPs(24 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
Protein Ontology	PR:000014026	protein ripply1

References

(Earliest) J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(23)