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CN725425 Gene Detail
Summary
  • Symbol
    CN725425
  • Name
    cDNA sequence CN725425
  • Synonyms
    Gm5807
  • Feature Type
    protein coding gene
  • IDs
    MGI:3613655
    NCBI Gene: 545126
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:91199494-91260894 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 46.04 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    254 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3613655
protein coding gene Chr15:91199145-91261134 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022247
protein coding gene Chr15:92479561-92550115 (+)
A/J MGP_AJ_G0022206
protein coding gene Chr15:88910257-88972141 (+)
AKR/J MGP_AKRJ_G0022181
protein coding gene Chr15:91552083-91616014 (+)
BALB/cJ MGP_BALBcJ_G0022212
protein coding gene Chr15:89031900-89094213 (+)
C3H/HeJ MGP_C3HHeJ_G0021982
protein coding gene Chr15:91547858-91621864 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022657
protein coding gene Chr15:95867291-95934908 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020183
protein coding gene Chr15:85057761-85118763 (+)
CAST/EiJ MGP_CASTEiJ_G0021504
protein coding gene Chr15:92365109-92433191 (+)
CBA/J MGP_CBAJ_G0021949
protein coding gene Chr15:99076569-99147418 (+)
DBA/2J MGP_DBA2J_G0022076
protein coding gene Chr15:88360232-88421237 (+)
FVB/NJ MGP_FVBNJ_G0022055
protein coding gene Chr15:87402011-87463412 (+)
LP/J MGP_LPJ_G0022147
protein coding gene Chr15:92617156-92686373 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022075
protein coding gene Chr15:103468220-103536537 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022672
protein coding gene Chr15:91660429-91730061 (+)
PWK/PhJ MGP_PWKPhJ_G0021245
protein coding gene Chr15:88405502-88467401 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021079
protein coding gene Chr15:91380163-91442013 (+)
WSB/EiJ MGP_WSBEiJ_G0021553
protein coding gene Chr15:92117511-92183664 (+)



Homology
more
  • Human Ortholog
    C12orf40, chromosome 12 open reading frame 40
  • Human Ortholog
    C12orf40, chromosome 12 open reading frame 40
    Orthology source: HGNC
  • Synonyms
    HEL-206, HEL-S-94
  • Links
    NCBI Gene ID: 283461
    neXtProt AC: NX_Q86WS4
    UniProt: Q86WS4

  • Chr Location
    12q12; chr12:39626167-39908300 (+)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    19 phenotype references
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000078932 Ensembl Gene Model | MGI Sequence Detail 61401 C57BL/6J ±  kb
transcript ENSMUST00000190436 Ensembl | MGI Sequence Detail 2041 Not Applicable  
polypeptide ENSMUSP00000140772 Ensembl | MGI Sequence Detail 652 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR027883 Protein of unknown function DUF4552
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5
Other
Accession IDs
less
MGI:3779525
References
more
  • Summaries
    All 28
    Diseases 1
    Phenotypes 19
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:233611 Hirata A, et al., Homeobox family Hoxc localization during murine palate formation. Congenit Anom (Kyoto). 2016 Jul;56(4):172-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/06/2019
MGI 6.14
The Jackson Laboratory