Itpa-ps2 Pseudogene Detail

Summary

• Symbol
  Itpa-ps2
• Name
  inosine triphosphatase (nucleoside triphosphate pyrophosphatase) pseudogene 2
• Synonyms
  Itpa pseudogene beta

• Feature Type
  pseudogene
• IDs
  MGI:3613364
  NCBI Gene: 100216460
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:95557482-95558070 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 50.19 cM, cytoband E4
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  178 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3613364	pseudogene	Chr9:95556914-95558118 (-)
129S1/SvImJ	ENSMUSG00200017098	pseudogene	Chr9:92679488-92680076 (-)
A/J	ENSMUSG00195018885	pseudogene	Chr9:91947842-91948430 (-)
AKR/J	ENSMUSG00220039626	pseudogene	Chr9:92293813-92294401 (-)
BALB/cJ	ENSMUSG00180028110	pseudogene	Chr9:92267443-92268031 (-)
C3H/HeJ	ENSMUSG00175012886	pseudogene	Chr9:92607469-92608057 (-)
C57BL/6NJ	ENSMUSG00215023319	pseudogene	Chr9:92572919-92573507 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012453	pseudogene	Chr9:91280564-91281151 (-)
CAST/EiJ	ENSTCUG00005014069	pseudogene	Chr9:92434791-92435377 (-)
CBA/J	ENSMUSG00210015425	pseudogene	Chr9:92449469-92450057 (-)
DBA/2J	ENSMUSG00185012004	pseudogene	Chr9:92635575-92636163 (-)
FVB/NJ	ENSMUSG00205024678	pseudogene	Chr9:92639238-92639826 (-)
JF1/MsJ	ENSUMUG00000047553	pseudogene	Chr9:92337519-92338107 (-)
LP/J	ENSMUSG00230020985	pseudogene	Chr9:92803955-92804543 (-)
NOD/ShiLtJ	ENSMUSG00190038710	pseudogene	Chr9:92259544-92260132 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010027209	pseudogene	Chr9:92333000-92333588 (-)
SPRET/EiJ	ENSMSPG00010004064	pseudogene	Chr9:94149236-94149808 (-)
WSB/EiJ	ENSIUOG00005024539	pseudogene	Chr9:91708126-91708714 (-)

Homology

• Gene Tree
  Itpa-ps2
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Itpa-ps2
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000100825 (Evidence)
• NCBI Gene
  100216460

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100825	Ensembl Gene Model | MGI Sequence Detail	589	C57BL/6J
transcript	ENSMUST00000188629	Ensembl | MGI Sequence Detail	589	Not Applicable

Molecular
Reagents

• All nucleic 1

  Genomic 1

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:100360 Behmanesh M, et al., Characterization of the structure and expression of mouse Itpa gene and its related sequences in the mouse genome. DNA Res. 2005 Feb 28;12(1):39-51