About   Help   FAQ
A930003O13Rik Gene Detail
Summary
  • Symbol
    A930003O13Rik
  • Name
    RIKEN cDNA A930003O13 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3612704
    NCBI Gene: 330052
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:22943908-22951882 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 10.07 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    95 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3612704
 lncRNA gene Chr5:22943908-22951905 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006587
 lincRNA gene Chr5:20308519-20316554 (-)
A/J MGP_AJ_G0006580
 lincRNA gene Chr5:19671854-19679829 (-)
AKR/J MGP_AKRJ_G0006551
 lincRNA gene Chr5:20432315-20440290 (-)
BALB/cJ MGP_BALBcJ_G0006555
 lincRNA gene Chr5:20134177-20142174 (-)
C3H/HeJ MGP_C3HHeJ_G0006502
 lincRNA gene Chr5:20519976-20527951 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006719
 lincRNA gene Chr5:21777025-21785022 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005988
 lincRNA gene Chr5:17669529-17677285 (-)
CAST/EiJ MGP_CASTEiJ_G0006429
 lincRNA gene Chr5:19812745-19820753 (-)
CBA/J MGP_CBAJ_G0006485
 lincRNA gene Chr5:22086149-22094124 (-)
DBA/2J MGP_DBA2J_G0006505
 lincRNA gene Chr5:19956489-19964529 (-)
FVB/NJ MGP_FVBNJ_G0006529
 lincRNA gene Chr5:19357794-19365791 (-)
LP/J MGP_LPJ_G0006588
 lincRNA gene Chr5:20714646-20722681 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006513
 lincRNA gene Chr5:23282554-23290594 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006725
 lincRNA gene Chr5:20025333-20033363 (-)
PWK/PhJ MGP_PWKPhJ_G0006367
 lincRNA gene Chr5:18988115-18996148 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006278
 lincRNA gene Chr5:19413691-19421560 (-)
WSB/EiJ MGP_WSBEiJ_G0006479
 lincRNA gene Chr5:20123185-20131220 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    4 involving A930003O13Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 330052 NCBI Gene Model | MGI Sequence Detail 7975 C57BL/6J ±  kb
transcript NR_027362 RefSeq | MGI Sequence Detail 1964 Not Specified  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3
References
more
  • Summaries
    All 16
    Diseases 1
    Phenotypes 9
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:119563 Alt B, et al., Arteries define the position of the thyroid gland during its developmental relocalisation. Development. 2006 Oct;133(19):3797-804
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory