Ccdc36
Gene Detail

Symbol Name ID

Ccdc36 coiled-coil domain containing 36 MGI:3612242

Feature Type

protein coding gene

Genetic Map

Chromosome 9

59.32 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)

Sequence Map

Chr9:108403642-108428484 bp, - strand From Ensembl annotation of GRCm38   24843 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:52256  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Gene Tree: Ccdc36

Human homologs

Human Homolog		CCDC36, coiled-coil domain containing 36
NCBI Gene ID		339834
neXtProt AC		NX_Q8IYA8
Human Synonyms		CT74
Human Chr (Location)		3p21.31; chr3:49235861-49295537 (+)  GRCh37.p10

Alleles and phenotypes

All alleles(4) : Targeted(3) Gene trapped(1)

Gene Ontology (GO) classifications

All GO classifications: (3 annotations)

Process	biological_process
Component	cellular_component
Function	molecular_function

Expression

Literature Summary: (1 records)
Data Summary: Results (69)    Tissues (6)    Images (22)
Theiler Stages: 23

Assay Type	Results
RNA in situ	69

cDNA source data(6)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(6) cDNA(6)
Microarray probesets(1)

Other database links

Ensembl Gene Model	ENSMUSG00000047220 (Evidence)
Entrez Gene	434438 (Evidence)
UniGene	425598
DFCI	TC1607750
DoTS	DT.94256692
NIA Mouse Gene Index	U102020
Consensus CDS Project	CCDS57701.1
International Mouse Knockout Project Status	Ccdc36

Sequences

Length	Strain/Species
genomic	ENSMUSG00000047220	Ensembl Gene Model | MGI Sequence Detail	24843	C57BL/6J
transcript	ENSMUST00000076592	Ensembl | MGI Sequence Detail	2859	Not Applicable
polypeptide	ENSMUSP00000075898	Ensembl | MGI Sequence Detail	574	Not Applicable

All sequences(11) RefSeq(2) UniProt(1)

Polymorphisms

SNPs(18 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
Protein Ontology	PR:000029327	coiled-coil domain-containing protein 36

References

(Earliest) J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(22)