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Nckap5l Gene Detail
Summary
  • Symbol
    Nckap5l
  • Name
    NCK-associated protein 5-like
  • Synonyms
    C230021P08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3609653
    NCBI Gene: 380969
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:99422035-99457748 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 56.13 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    307 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3609653
protein coding gene Chr15:99422034-99457938 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022331
protein coding gene Chr15:101265323-101303905 (-)
A/J MGP_AJ_G0022289
protein coding gene Chr15:97231787-97267394 (-)
AKR/J MGP_AKRJ_G0022265
protein coding gene Chr15:100228660-100265973 (-)
BALB/cJ MGP_BALBcJ_G0022295
protein coding gene Chr15:97420941-97456939 (-)
C3H/HeJ MGP_C3HHeJ_G0022063
protein coding gene Chr15:100291535-100328205 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022740
protein coding gene Chr15:105035629-105076993 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020266
protein coding gene Chr15:93127084-93163577 (-)
CAST/EiJ MGP_CASTEiJ_G0021587
protein coding gene Chr15:101152191-101193134 (-)
CBA/J MGP_CBAJ_G0022032
protein coding gene Chr15:108603212-108645662 (-)
DBA/2J MGP_DBA2J_G0022159
protein coding gene Chr15:96671026-96707289 (-)
FVB/NJ MGP_FVBNJ_G0022139
protein coding gene Chr15:95661527-95697348 (-)
LP/J MGP_LPJ_G0022230
protein coding gene Chr15:101408729-101447594 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022159
protein coding gene Chr15:112527862-112565759 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022755
protein coding gene Chr15:100321632-100359695 (-)
PWK/PhJ MGP_PWKPhJ_G0021326
protein coding gene Chr15:96806282-96843450 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021161
protein coding gene Chr15:100177074-100221306 (-)
WSB/EiJ MGP_WSBEiJ_G0021638
protein coding gene Chr15:100854236-100892418 (-)



Homology
more
  • Human Ortholog
    NCKAP5L, NCK associated protein 5 like
  • Vertebrate Orthologs
    8
  • Human Ortholog
    NCKAP5L, NCK associated protein 5 like
    Orthology source: HomoloGene, HGNC
  • Synonyms
    Cep169, FP1193, KIAA1602
  • Links
    NCBI Gene ID: 57701
    neXtProt AC: NX_Q9HCH0
    UniProt: Q9HCH0

  • Chr Location
    12q13.12; chr12:49791139-49828750 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    24 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000023009 Ensembl Gene Model | MGI Sequence Detail 35714 C57BL/6J ±  kb
transcript ENSMUST00000023747 Ensembl | MGI Sequence Detail 4853 Not Applicable  
polypeptide ENSMUSP00000023747 Ensembl | MGI Sequence Detail 1323 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 28
    cDNA 28

    Microarray probesets 2
References
more
  • Summaries
    All 44
    Developmental Gene Expression 2
    Diseases 1
    Gene Ontology 3
    Phenotypes 24
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:233611 Hirata A, et al., Homeobox family Hoxc localization during murine palate formation. Congenit Anom (Kyoto). 2016 Jul;56(4):172-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory