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Rft1
Gene Detail
Symbol

Name
ID
Rft1
RFT1 homolog (S. cerevisiae)
MGI:3607791
Feature Type
protein coding gene
Genetic Map
Chromosome 14
18.90 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr14:30654360-30691317 bp, + strand
From VEGA annotation of GRCm38

  36958 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:5343  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Rft1

Human
homologs
Human Homolog RFT1, RFT1 homolog (S. cerevisiae)
NCBI Gene ID 91869
neXtProt AC  NX_Q96AA3
Human Synonyms  CDG1N
Human Chr (Location)  3p21.1; chr3:53085633-53130464 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human RFT1
Mutations,
alleles, and
phenotypes
All mutations/alleles(9) : Gene trapped(7) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Rft1 interacts with 194 markers (Mir7b, Mir9-1, Mir9-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process carbohydrate transport, glycolipid translocation, ...
Component endoplasmic reticulum membrane, integral component of membrane, ...
Function lipid transporter activity
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
cDNA source data(16)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(16) cDNA(16)
Microarray probesets(1)
Other database
links
VEGA Gene ModelOTTMUSG00000025088 (Evidence)
Ensembl Gene ModelENSMUSG00000052395 (Evidence)
Entrez Gene328370 (Evidence)
UniGene259657
DoTSDT.94226129, DT.94226128, DT.94166270, DT.91352563
NIA Mouse Gene IndexU015447
Consensus CDS ProjectCCDS26896.1
International Mouse Knockout Project StatusRft1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000025088 VEGA Gene Model | MGI Sequence Detail 36958 C57BL/6J ±  kb
transcript OTTMUST00000061730 VEGA | MGI Sequence Detail 2387 Not Applicable 
polypeptide OTTMUSP00000030345 VEGA | MGI Sequence Detail 541 Not Applicable 

For the selected sequences
All sequences(48) RefSeq(4) UniProt(7)
Polymorphisms
SNPs within 2kb(183 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007594 RFT1
Protein Ontology PR:000013919 protein RFT1
References
(Earliest) J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(28)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory