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Spata21 Gene Detail
Summary
  • Symbol
    Spata21
  • Name
    spermatogenesis associated 21
  • Feature Type
    protein coding gene
  • IDs
    MGI:3607787
    NCBI Gene: 329972
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:141088333-141112760 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 73.36 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    231 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3607787
protein coding gene Chr4:141088318-141112760 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029038
protein coding gene Chr4:144098308-144129560 (+)
A/J MGP_AJ_G0028997
protein coding gene Chr4:137850257-137874545 (+)
AKR/J MGP_AKRJ_G0028949
protein coding gene Chr4:141819060-141846152 (+)
BALB/cJ MGP_BALBcJ_G0029021
protein coding gene Chr4:138538131-138563787 (+)
C3H/HeJ MGP_C3HHeJ_G0028735
protein coding gene Chr4:142206372-142230556 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029462
protein coding gene Chr4:149146839-149175316 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026733
protein coding gene Chr4:130766467-130792051 (+)
CAST/EiJ MGP_CASTEiJ_G0028167
protein coding gene Chr4:140458745-140484753 (+)
CBA/J MGP_CBAJ_G0028699
protein coding gene Chr4:153442747-153473056 (+)
DBA/2J MGP_DBA2J_G0028849
protein coding gene Chr4:138245175-138269966 (+)
FVB/NJ MGP_FVBNJ_G0028816
protein coding gene Chr4:137352125-137374906 (+)
LP/J MGP_LPJ_G0028948
protein coding gene Chr4:144119392-144151910 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028842
protein coding gene Chr4:157295633-157327413 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029500
protein coding gene Chr4:142347428-142380475 (+)
PWK/PhJ MGP_PWKPhJ_G0027888
protein coding gene Chr4:135128669-135157411 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027713
protein coding gene Chr4:138174803-138199443 (+)
WSB/EiJ MGP_WSBEiJ_G0028245
protein coding gene Chr4:142632324-142662255 (+)



Homology
more
  • Human Ortholog
    SPATA21, spermatogenesis associated 21
  • Vertebrate Orthologs
    7
  • Human Ortholog
    SPATA21, spermatogenesis associated 21
    Orthology source: HomoloGene, HGNC
  • Synonyms
    spergen2, spergen-2
  • Links
    NCBI Gene ID: 374955
    neXtProt AC: NX_Q7Z572
    UniProt: Q7Z572

  • Chr Location
    1p36.13; chr1:16397271-16437842 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Gene trapped
    1
  • Targeted
    1
  • Genomic Mutations
    3 involving Spata21
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000045004 Ensembl Gene Model | MGI Sequence Detail 24428 C57BL/6J ±  kb
transcript ENSMUST00000051907 Ensembl | MGI Sequence Detail 2526 Not Applicable  
polypeptide ENSMUSP00000053080 Ensembl | MGI Sequence Detail 681 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 13
    Genomic 1
    cDNA 12

    Microarray probesets 2
References
more
  • Summaries
    All 22
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/15/2019
MGI 6.14
The Jackson Laboratory