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Map6d1 Gene Detail
Summary
  • Symbol
    Map6d1
  • Name
    MAP6 domain containing 1
  • Synonyms
    A330066I15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3607784
    NCBI Gene: 208158
Location & Maps
more
  • Sequence Map
    Chr16:20233310-20241358 bp, - strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      8049 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 12.39 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    MAP6D1, MAP6 domain containing 1
  • Vertebrate Orthologs
    6
  • Human Ortholog
    MAP6D1, MAP6 domain containing 1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    MAPO6D1, SL21
  • Links
    NCBI Gene ID: 79929
    neXtProt AC: NX_Q9H9H5

  • Chr Location
    3q27.1; chr3:183815876-183825605 (-)  GRCh38.p2

Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000041205 Ensembl Gene Model | MGI Sequence Detail 8049 C57BL/6J ±  kb
transcript ENSMUST00000040880 Ensembl | MGI Sequence Detail 3273 Not Applicable  
polypeptide ENSMUSP00000043332 Ensembl | MGI Sequence Detail 191 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    48 from dbSNP Build 142
Protein
Information
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  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000010148 MAP6 domain-containing protein 1
  • InterPro Domains
    IPR007882 Microtubule-associated protein 6
Molecular
Reagents
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  • All nucleic 9
    cDNA 9

    Microarray probesets 3
References
more
  • Summaries
    All 19
    Gene Ontology 4
  • Earliest
    J:116920 Gory-Faure S, et al., STOP-like protein 21 is a novel member of the STOP family, revealing a Golgi localization of STOP proteins. J Biol Chem. 2006 Sep 22;281(38):28387-96
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
08/23/2016
MGI 6.05
The Jackson Laboratory