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Sertm1 Gene Detail
Summary
  • Symbol
    Sertm1
  • Name
    serine rich and transmembrane domain containing 1
  • Synonyms
    6030405A18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3607715
    NCBI Gene: 329641
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:54897068-54915887 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 25.90 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    214 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3607715
protein coding gene Chr3:54897068-54915887 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027218
protein coding gene Chr3:53614471-53635224 (-)
A/J MGP_AJ_G0027178
protein coding gene Chr3:51954565-51974331 (-)
AKR/J MGP_AKRJ_G0027148
protein coding gene Chr3:53024749-53044061 (-)
BALB/cJ MGP_BALBcJ_G0027191
protein coding gene Chr3:51807376-51826646 (-)
C3H/HeJ MGP_C3HHeJ_G0026934
protein coding gene Chr3:53230837-53250388 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027637
protein coding gene Chr3:55649374-55668068 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024996
protein coding gene Chr3:48469256-48488566 (-)
CAST/EiJ MGP_CASTEiJ_G0026386
protein coding gene Chr3:53362657-53386316 (-)
CBA/J MGP_CBAJ_G0026910
protein coding gene Chr3:57434164-57454749 (-)
DBA/2J MGP_DBA2J_G0027044
protein coding gene Chr3:51509300-51528668 (-)
FVB/NJ MGP_FVBNJ_G0027012
protein coding gene Chr3:50481448-50500141 (-)
LP/J MGP_LPJ_G0027156
protein coding gene Chr3:54322711-54344243 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027030
protein coding gene Chr3:61543609-61562815 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027695
protein coding gene Chr3:52937953-52959987 (-)
PWK/PhJ MGP_PWKPhJ_G0026118
protein coding gene Chr3:51180742-51199924 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025931
protein coding gene Chr3:52693731-52712476 (-)
WSB/EiJ MGP_WSBEiJ_G0026460
protein coding gene Chr3:53068375-53087862 (-)



Homology
more
  • Human Ortholog
    SERTM1, serine rich and transmembrane domain containing 1
  • Vertebrate Orthologs
    8
  • Human Ortholog
    SERTM1, serine rich and transmembrane domain containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C13orf36
  • Links
    NCBI Gene ID: 400120
    neXtProt AC: NX_A2A2V5
    UniProt: A2A2V5

  • Chr Location
    13q13.3; chr13:36673912-36697839 (+)  GRCh38.p7

Human Diseases
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  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 329641 NCBI Gene Model | MGI Sequence Detail 18820 C57BL/6J ±  kb
transcript NM_177854 RefSeq | MGI Sequence Detail 3086 C57BL/6  
polypeptide Q8CD78 UniProt | EBI | MGI Sequence Detail 107 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000031083 serine-rich and transmembrane domain-containing protein 1
  • InterPro Domains
    IPR031741 Serine-rich and transmembrane domain-containing protein
Molecular
Reagents
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  • All nucleic 5
    cDNA 5

    Microarray probesets 2
References
more
  • Summaries
    All 24
    Developmental Gene Expression 1
    Diseases 1
    Gene Ontology 2
    Phenotypes 6
  • Earliest
    J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
  • Latest
    J:174459 Boyle MP, et al., Cell-type-specific consequences of Reelin deficiency in the mouse neocortex, hippocampus, and amygdala. J Comp Neurol. 2011 Aug 1;519(11):2061-89

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory