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Ccdc113 Gene Detail
Summary
  • Symbol
    Ccdc113
  • Name
    coiled-coil domain containing 113
  • Feature Type
    protein coding gene
  • IDs
    MGI:3606076
    NCBI Gene: 244608
  • Gene Overview
    MyGene.info: CCDC113
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:95534085-95558890 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 47.12 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    126 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3606076
protein coding gene Chr8:95534060-95558890 (.)
129S1/SvImJ MGP_129S1SvImJ_G0033988
protein coding gene Chr8:97016899-97044889 (+)
A/J MGP_AJ_G0033971
protein coding gene Chr8:93216176-93240738 (+)
AKR/J MGP_AKRJ_G0033897
protein coding gene Chr8:95751548-95776059 (+)
BALB/cJ MGP_BALBcJ_G0033963
protein coding gene Chr8:93302817-93327981 (+)
C3H/HeJ MGP_C3HHeJ_G0033673
protein coding gene Chr8:96487342-96513886 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034484
protein coding gene Chr8:100570535-100596742 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031425
protein coding gene Chr8:87019079-87044182 (+)
CAST/EiJ MGP_CASTEiJ_G0033005
protein coding gene Chr8:96075064-96101511 (+)
CBA/J MGP_CBAJ_G0033649
protein coding gene Chr8:103850889-103885124 (+)
DBA/2J MGP_DBA2J_G0033803
protein coding gene Chr8:92706199-92731607 (+)
FVB/NJ MGP_FVBNJ_G0033750
protein coding gene Chr8:91658439-91686008 (+)
LP/J MGP_LPJ_G0033895
protein coding gene Chr8:97152910-97179741 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033792
protein coding gene Chr8:106083622-106114349 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034502
protein coding gene Chr8:95939173-95969050 (+)
PWK/PhJ MGP_PWKPhJ_G0032707
protein coding gene Chr8:92066332-92093593 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032544
protein coding gene Chr8:94786064-94811308 (+)
WSB/EiJ MGP_WSBEiJ_G0033117
protein coding gene Chr8:96450508-96477528 (+)



Homology
more
  • Human Ortholog
    CCDC113, coiled-coil domain containing 113
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CCDC113, coiled-coil domain containing 113
    Orthology source: HomoloGene, HGNC
  • Synonyms
    HSPC065
  • Links
    NCBI Gene ID: 29070
    neXtProt AC: NX_Q9H0I3
    UniProt: Q9H0I3

  • Chr Location
    16q21; chr16:58196863-58283836 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000036598 Ensembl Gene Model | MGI Sequence Detail 24806 C57BL/6J ±  kb
transcript ENSMUST00000041569 Ensembl | MGI Sequence Detail 1288 Not Applicable  
polypeptide ENSMUSP00000049497 Ensembl | MGI Sequence Detail 377 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 13
    cDNA 12
    Primer pair 1

    Microarray probesets 2
References
more
  • Summaries
    All 22
    Developmental Gene Expression 3
    Gene Ontology 2
    Phenotypes 2
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:240319 Stauber M, et al., Identification of FOXJ1 effectors during ciliogenesis in the foetal respiratory epithelium and embryonic left-right organiser of the mouse. Dev Biol. 2017 Mar 15;423(2):170-188

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory