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BC049715 Gene Detail
Summary
  • Symbol
    BC049715
  • Name
    cDNA sequence BC049715
  • Feature Type
    protein coding gene
  • IDs
    MGI:3605234
    NCBI Gene: 320135
  • Alliance
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:136827626-136840662 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 66.72 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    323 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3605234
protein coding gene Chr6:136827626-136841920 (.)
129S1/SvImJ MGP_129S1SvImJ_G0031427
protein coding gene Chr6:141289783-141323076 (+)
A/J MGP_AJ_G0031403
protein coding gene Chr6:135679913-135733223 (+)
AKR/J MGP_AKRJ_G0031331
protein coding gene Chr6:139820358-139866092 (+)
BALB/cJ MGP_BALBcJ_G0031410
protein coding gene Chr6:135562405-135599384 (+)
C3H/HeJ MGP_C3HHeJ_G0031131
protein coding gene Chr6:139857048-139894865 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031871
protein coding gene Chr6:145169313-145182270 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029001
protein coding gene Chr6:134835391-134848522 (+)
CAST/EiJ MGP_CASTEiJ_G0030500
protein coding gene Chr6:139368167-139394550 (+)
CBA/J MGP_CBAJ_G0031091
protein coding gene Chr6:150559958-150619520 (+)
DBA/2J MGP_DBA2J_G0031248
protein coding gene Chr6:134572471-134608932 (+)
FVB/NJ MGP_FVBNJ_G0031199
protein coding gene Chr6:133475242-133509024 (+)
LP/J MGP_LPJ_G0031332
protein coding gene Chr6:141411572-141445990 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031239
protein coding gene Chr6:154452283-154503534 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031903
protein coding gene Chr6:139577053-139609252 (+)
PWK/PhJ MGP_PWKPhJ_G0030226
protein coding gene Chr6:133082098-133104604 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030050
protein coding gene Chr6:137848586-137873048 (+)
WSB/EiJ MGP_WSBEiJ_G0030592
protein coding gene Chr6:140219328-140243408 (+)



Homology
more
  • Human Ortholog
    C12orf60, chromosome 12 open reading frame 60
  • Vertebrate Orthologs
    7
  • Human Ortholog
    C12orf60, chromosome 12 open reading frame 60
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 144608
    neXtProt AC: NX_Q5U649
    UniProt: Q5U649

  • Chr Location
    12p13.1-p12.3; chr12:14567991-14823858 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotype references
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000047515 Ensembl Gene Model | MGI Sequence Detail 13037 C57BL/6J ±  kb
transcript ENSMUST00000052702 Ensembl | MGI Sequence Detail 1120 Not Applicable  
polypeptide ENSMUSP00000049512 Ensembl | MGI Sequence Detail 247 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR027895 Protein of unknown function DUF4533
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Phenotypes 5
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:236599 Dickinson ME, et al., High-throughput discovery of novel developmental phenotypes. Nature. 2016 Sep 14;537(7621):508-514

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory