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Slc28a1 Gene Detail
Summary
  • Symbol
    Slc28a1
  • Name
    solute carrier family 28 (sodium-coupled nucleoside transporter), member 1
  • Synonyms
    Cnt1
  • Feature Type
    protein coding gene
  • IDs
    MGI:3605073
    NCBI Gene: 434203
Location & Maps
more
  • Sequence Map
    Chr7:81114799-81170416 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      55618 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    SLC28A1, solute carrier family 28 member 1
  • Vertebrate Orthologs
    7
  • Human Ortholog
    SLC28A1, solute carrier family 28 member 1
    Orthology source: HomoloGene
  • Synonyms
    CNT1, HCNT1
  • Links
    NCBI Gene ID: 9154
    neXtProt AC: NX_O00337

  • Chr Location
    15q25.3; chr15:84884577-84975651 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    17 phenotype references
  • All Mutations and Alleles
    37
  • Chemically induced (other)
    1
  • Gene trapped
    32
  • Radiation induced
    2
  • Targeted
    2
  • Genomic Mutations
    3 involving Slc28a1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000031345 VEGA Gene Model | MGI Sequence Detail 55618 C57BL/6J ±  kb
transcript OTTMUST00000077656 VEGA | MGI Sequence Detail 2846 Not Applicable  
polypeptide OTTMUSP00000041121 VEGA | MGI Sequence Detail 648 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    479 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR008276 Concentrative nucleoside transporter
    IPR011657 Concentrative nucleoside transporter C-terminal domain
    IPR018270 Concentrative nucleoside transporter, metazoan/bacterial
    IPR002668 Concentrative nucleoside transporter N-terminal domain
    IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain
Molecular
Reagents
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  • All nucleic 6
    cDNA 6

    Microarray probesets 1
References
more
  • Summaries
    All 21
    Developmental Gene Expression 3
    Gene Ontology 2
    Phenotypes 17
  • Earliest
    J:85162 Hansen J, et al., A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Proc Natl Acad Sci U S A. 2003 Aug 19;100(17):9918-22
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
05/17/2016
MGI 6.03
The Jackson Laboratory